Gene Hore_19400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19400 
Symbol 
ID7312755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2078198 
End bp2079970 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content46% 
IMG OID643612386 
ProductV-type ATP synthase subunit A 
Protein accessionYP_002509682 
Protein GI220932774 
COG category[C] Energy production and conversion 
COG ID[COG1155] Archaeal/vacuolar-type H+-ATPase subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAAAA AGGGTGAAAT AGTATTTGTC AATGGGCCTG TAGTAAAGGC CGATAAGATG 
AATGGTTTTA TCATGAATGA GCTTGTTTAT GTCGGAAAAG AAAGGCTCAT TGGAGAGATA
ATTGAACTTG AGGGTGACCT GGCCACAATT CAGGTTTATG AAGAGACAAC AGAGATGCAA
CCGGGTGAGC CGGTTTTTTC TACAGGCAGC CCGTTATCGG TGGAACTGGG ACCGGGGATA
ATCGGAAATA TATTTGATGG TATTCAAAGG CCTTTACCGG TTATTGCCGA AAAAACAGGT
TCCTTTATAA AAAGAGGGAT TGAGGTTAAC CCCCTGGATC GGGACCGGGA ATGGACAGTA
TCTGTTAAGG TAAAACTTGG TGACAGGGTT AAACCTGGCC AGGTAGTTGC TGAAGTACCG
GAAACCAGTA TTGTTACTCA CCGGGTTATG GTTCCCCCTC ATCTGTCAGG AGAGGTGGTT
GAGGTTGTTC CCAATGGTAA ATATACTGTG GATCAGGAAA TTGTAACTGT AAAAGATGAT
AAGGGGAATA ACCACCAGAT TCGACTCCAT CAGAAATGGC CGGTCAGGCG GCCAAGGCCC
TGTGGAGAGC GCTTACCGAT CAAAAAACCC CTCCTTACCG GTCAGAGGGT ATTTGATACC
TTCTTCCCCC TGGGGATGGG GGGAACAGCT GCTATCCCCG GAGGATTCGG GGCCGGAAAA
ACCATGACCC AGCACCAGCT GGCCAAATGG TCCAGTGCCG ATATAATTGT TTATGTGGGG
TGTGGGGAAC GCGGTAATGA GATGACGGAT GTTCTGGAGG AGTTCCCCAA ACTGGAAGAC
CCTTCAACCG GGAAATCGAT GATGGAGAGA ACGGTTTTAA TTGCCAACAC TTCCAATATG
CCGGTTGCGG CAAGGGAGGC CAGTATTTAT ACCGGCATTA CTATAGCCGA GTTCTACCGG
GATATGGGCT ATAATGTGGC CCTGATGGCA GATTCGACAT CACGCTGGGC CGAAGCTTTA
AGGGAAATAT CCGGACGTCT GGAAGAAATG CCTGCTGAAG AAGGTTTTCC AGCCTATCTT
CCAAGCCGGT TAGCCGAGTT TTATGAAAGG GCCGGTTACG TAAAAACCCT GGGGCAGGAC
AGGGAGGGTT CTATCTCACT GATCGGGGCT GTTTCTCCAC CTGGTGGTGA TTTTTCAGAA
CCGGTTACCC AGAATACCAA ACGTTATGTT CGCTGTTTCT GGGCTCTGGA TAAGAGTCTG
GCCAGTGCCC GGCATTTCCC GGCTGTTAAC TGGCTGGAAA GCTATAGTGA ATACCTGGAG
GATCTTTCAG GCTGGTTGAA GGAAAATATA AACGAGGACT GGATTAAATT AAGGAATATG
GCCATGGAGC TTTTGAAGGA AGAAGACCGG CTCCAGGAGA TTGTCAAACT GGTTGGTGAA
GATGTCCTGC CCGATAACCA GCGCCTTATT CTTGAGGTTG CCAGATTGAT TAAGATTGGT
TTTCTCCAGC AGAATGCCTT CAGTAAAGTA GACCGGTTCG CCACTCCGGA AAAGCAGTAC
TGGATGTTAA AAATTATTAT GTTCCTATAT GAAAAGGCCA GACCTTTAAT TAAAAACAAT
ATTCCGATAA GCCGGGTTAA GAATAATGAA CTATTCAGTG AAGTTATAAA AATGAAAGAG
AATATTCCCA ATGGTGATTT AGATAAATTC AAGGATTTAA TGGCCAGGAT TGAAGAATAT
TACAACAGAC TATGGGAAAA TTATCAGGAG TAG
 
Protein sequence
MDKKGEIVFV NGPVVKADKM NGFIMNELVY VGKERLIGEI IELEGDLATI QVYEETTEMQ 
PGEPVFSTGS PLSVELGPGI IGNIFDGIQR PLPVIAEKTG SFIKRGIEVN PLDRDREWTV
SVKVKLGDRV KPGQVVAEVP ETSIVTHRVM VPPHLSGEVV EVVPNGKYTV DQEIVTVKDD
KGNNHQIRLH QKWPVRRPRP CGERLPIKKP LLTGQRVFDT FFPLGMGGTA AIPGGFGAGK
TMTQHQLAKW SSADIIVYVG CGERGNEMTD VLEEFPKLED PSTGKSMMER TVLIANTSNM
PVAAREASIY TGITIAEFYR DMGYNVALMA DSTSRWAEAL REISGRLEEM PAEEGFPAYL
PSRLAEFYER AGYVKTLGQD REGSISLIGA VSPPGGDFSE PVTQNTKRYV RCFWALDKSL
ASARHFPAVN WLESYSEYLE DLSGWLKENI NEDWIKLRNM AMELLKEEDR LQEIVKLVGE
DVLPDNQRLI LEVARLIKIG FLQQNAFSKV DRFATPEKQY WMLKIIMFLY EKARPLIKNN
IPISRVKNNE LFSEVIKMKE NIPNGDLDKF KDLMARIEEY YNRLWENYQE