| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_19280 |
|---|
| Symbol | |
|---|
| ID | 7312743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 2063489 |
|---|
| End bp | 2065318 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643612374 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002509670 |
|---|
| Protein GI | 220932762 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT TTGAAGAACA GGAGTATCAT AAACGGTTTG ATTTCGACCT CTGGAAGAAG
ATTTTTTCGT ATATCAAGCC ATATAAAAAG TATTTATTAT GGCTGGCAGT GGTTATGGTC
GGAGTTGCCG GAATCGATGC TATTTTTCCC TTTATGAATA AAATAGCCAT TGATAAATAT
GTAGTTAAGG ACGATATTAA CGGATTATAT AGTTTCGGGG TTAAATATGG TATTCTGGTT
ATTATCCAGG CCATCAATGT TTTCTTTTTC ATTGCCATTG CCGGAAAGAT TGAAACCGGG
GTTGCCTACG ATGTCAGGAA AAGAGCCTTT AAAAGGCTCC AGGAGCTATC CTTTTCCTAT
TATGATAAAA CTCCGGTCGG CTGGATGATG GCCAGGATGA CCTCGGATAT CCGCCGGTTG
GGTGAGACCA TTGCCTGGGG TCTGGTTGAT TTTGTCTGGG GTTTTTCCAT GATGGTTGCC
ATTATGGGAA TTATGCTGGC TTTAAACTGG AAACTTGCTT TAATAACCCT GTCGGTGGTA
CCTATCCTGG TGGTAGCCAG TCTGTATTTC CAGAAGAAAA TACTGACTGC CTACCGTAAG
GTAAGGAAAA TAAATTCAAA GATTACAGGG GCTTTCAATG AAGGGATTAT GGGGGCAAAA
ACCACCAAAA CCCTGGTCAG GGAGAAGGAA AACCTGGAGG AATTTAAAGG GATTACCGGT
AAAATGAGAC ACCATTCTAT CCGGGCAGCT ATATTTTCAT CTCTATTTTT ACCGGTGGTA
TTAACCCTTA GCAGTGTCGG TACAGCCCTT GCCCTGTGGT ACGGGGGTGA GGGGGTAGTT
AAAGGGATAA TTACCTATGG AACCCTGGTA GCCTTTTTAA ACTATACCGT GCAGTTTTTC
GAGCCGGTCA GGCAGCTGGC CCGCATCTTT GCTGAACTCC AGTCCGCCCA GGCCTCTGCT
GAAAGGGTAT TATCTTTAAT AGAAACACAA GTGGAGATTG AGGATGCTCC CGGGGTTATT
GCCCGATACG GCGATACCTT TAACCCCAGG AAGGAAAACT GGCCATCCCT TAAAGGAGAT
GTTTCCTTTG TAAATGTTTC CTTCAGTTAT CAGGGTGGAG AGAAGGTATT AAAGGATTTT
AATCTTGATG TAAAAGCCGG GGAAACAGTA GCTCTGGTCG GGGAAACCGG GTCCGGGAAA
AGTACTATTG TAAACCTTAT TTGCCGGTTT TATGAACCGA CCGGTGGCAA AATTCTCATA
GATGGGGTTG ATTACCGCAA AAAGTCCCAA CTCTGGCTCC GGAGTAACCT GGGTTATGTG
CTTCAAACCC CCCATCTTTT CAGTGGTACC ATTAAAGAAA ATATCAGGTA TGGTCGGCTG
GAAGCCAGTG ATGAAGAGGT AATTAAGGCT GCTAAAATCG TTAACGCTCA TGACTTTATT
ATTAATTTAA AAGACGGTTA TGATACTGTG GTCGGTGAGA GTGGGAGTGG CTTATCGACC
GGGGAAAAAC AGTTGATTTC CTTTGCCCGG GCCATTCTGG CTAACCCCAG GATCTTTGTC
CTTGATGAAG CTACATCTTC TATTGACACC GAGATGGAGC AGATTATTCA AAAGGCTGTT
GATAAACTTC TTGAGGGTCG CACCAGTTTT ATTATAGCTC ACCGACTATC AACGGTAAGG
TCTGCTGACC GTATTCTGGT TATCAAGGAT GGAAAAATAA TTGAAGAGGG TAATCATAAT
CAGCTTCTAA AACGCAAAGG TTATTATTAC CGCCTCTATA CAAATCAGTT TATTGAAGAG
GAAAAACCAG AGTGCTGTCA AGCCAACTAA
|
|---|
| Protein sequence | MNKFEEQEYH KRFDFDLWKK IFSYIKPYKK YLLWLAVVMV GVAGIDAIFP FMNKIAIDKY
VVKDDINGLY SFGVKYGILV IIQAINVFFF IAIAGKIETG VAYDVRKRAF KRLQELSFSY
YDKTPVGWMM ARMTSDIRRL GETIAWGLVD FVWGFSMMVA IMGIMLALNW KLALITLSVV
PILVVASLYF QKKILTAYRK VRKINSKITG AFNEGIMGAK TTKTLVREKE NLEEFKGITG
KMRHHSIRAA IFSSLFLPVV LTLSSVGTAL ALWYGGEGVV KGIITYGTLV AFLNYTVQFF
EPVRQLARIF AELQSAQASA ERVLSLIETQ VEIEDAPGVI ARYGDTFNPR KENWPSLKGD
VSFVNVSFSY QGGEKVLKDF NLDVKAGETV ALVGETGSGK STIVNLICRF YEPTGGKILI
DGVDYRKKSQ LWLRSNLGYV LQTPHLFSGT IKENIRYGRL EASDEEVIKA AKIVNAHDFI
INLKDGYDTV VGESGSGLST GEKQLISFAR AILANPRIFV LDEATSSIDT EMEQIIQKAV
DKLLEGRTSF IIAHRLSTVR SADRILVIKD GKIIEEGNHN QLLKRKGYYY RLYTNQFIEE
EKPECCQAN
|
|---|
| |