| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_19190 |
|---|
| Symbol | |
|---|
| ID | 7312734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 2051970 |
|---|
| End bp | 2053010 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643612365 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_002509661 |
|---|
| Protein GI | 220932753 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.329704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGTAA CTCAGAAGGA TATTGCGGAT AGACTCGGTA TTTCCCGGAC TACAGTAGCC
CGGGTTTTAA ATAATAGTGG GCCAGTAGAT GAAGGGACCC GCAAAAAGGT TTTGAAGGTT
GCCAGGGAAC TGGGGTATAA TGTAAACCCT ATTGCTAAAT CTCTGGCCAT GAAAAAGAAG
ATGTATATTT ATGCTTTTGT AGTTAAGTCA TATAATGAAA AATTCAACAG TGAAATAATC
AGGGGTTTAA AGGCAGCCTA CCGGGAGTTT AAAAACTATG GTGTAAAATT GAAGATTGTT
GAGCTCGGGG CTGAAGAGCC TGAAAGGCAA TTTAATCAAA TTGAAGGGTT TTTAGATGAA
AGACAGATAG ATGGAATAAT CCTTACTCCA TTAATGGAAC AGGTAAAGGA AGTTATTAAA
CGGTTTAAAG ATAAAAATAT ACCGGTAGCA ACCCTGGATA TGGATATTAA GGGCTCAGAG
CGCAATTTTT TCGTTGGCCC CAATTACTAT AAGCTGGGAC GGGTAGCCGC TGAGCTTATG
GCAAAGTTTA TAAAAAAAGA GGGTAAAATA CTCGTTATAT CTTCAAGTTA TGATTTTTAT
TCAGTCCGGG AACGGTTAAA AGGTTTTCTC GATAAAATAG GGGAATATTC CCACATAGAA
ACTACCGGGC CTTATTACGA ATATAGCCTT GAGAAAATAT ATGATATCAC CAGAAGGAAA
TTTGATAAGG AAATAACAGG TATCTATACT ACTTTCGGAA CTGAATATGC CGTTAAGGCT
CTGGTTGATA TGGGAATAAA TAGGGAAGTA ATAGTGATTG CCAATGATTT AAATGAAGAA
ATAGAAGATT GTGTTAAAAA AGGGTACGTA CAGGCCATTG TCTACCAGAG GCCGTTTATG
CAGGGATATA TTGCCGGGAA AAAGATGTTT GATTGTATCT TTAAAAACAT GACTCCTTCT
AAGGATAAAT ATTTTGTTGG CTATGATATT TTACTGGAAG AGAGCCTGGA TAATGTTCAC
AAAAATATTC TGGAGCTGTA A
|
|---|
| Protein sequence | MGVTQKDIAD RLGISRTTVA RVLNNSGPVD EGTRKKVLKV ARELGYNVNP IAKSLAMKKK
MYIYAFVVKS YNEKFNSEII RGLKAAYREF KNYGVKLKIV ELGAEEPERQ FNQIEGFLDE
RQIDGIILTP LMEQVKEVIK RFKDKNIPVA TLDMDIKGSE RNFFVGPNYY KLGRVAAELM
AKFIKKEGKI LVISSSYDFY SVRERLKGFL DKIGEYSHIE TTGPYYEYSL EKIYDITRRK
FDKEITGIYT TFGTEYAVKA LVDMGINREV IVIANDLNEE IEDCVKKGYV QAIVYQRPFM
QGYIAGKKMF DCIFKNMTPS KDKYFVGYDI LLEESLDNVH KNILEL
|
|---|
| |