Gene Hore_19140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19140 
Symbol 
ID7312729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2046492 
End bp2048057 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content44% 
IMG OID643612360 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_002509656 
Protein GI220932748 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000186366 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGTT ATGGTTTTTT ATCACTTTTG CCACCATTGC TGGCTATAAT CCTGGCCTGG 
TGGACAAAGG AAGTTATTCT TTCATTGTTA ATCGGTATAT TTGCCGGGGC TACCATTCTG
GCAAACAATA ATCCCCTGAT TGGTTTTTTG CGGACTTTCG ATAAGTATAT AGTTTCTTCG
GTCGCCGATT CCTGGAATGC TGCCGTTTTA ATTTTTCTGA TTGCCATTGG AGGGATGATT
GGAATAATTA CCAACGCCGG TGGCGTTGCC GCTATTGGTG ACTATATTGC CAGAAAGGCC
CGGTCTGTTA AAACCACCCA GTTTGCAACA TGGTTAATGG GAATTGCAAT TTTCTTTGAT
GATTATGCCA ACTCCCTGAT TGTTGGTAAT ACAATGAGGC CCATTACTGA CCGGATGAAG
ATTTCCAGGG AAAAGTTAGC CTATATCGTT GATGCAACAG CAGCACCCAT TACCAGCATG
GCTCTGGTTT CCACCTGGGT TGCCTATGAA ATGGGGTTAA TAAAAGATGC CCTTGACAAG
ATTAATCTTG ATACAAATGT TTATACTATT TTTATTAAGA GTATTCCTTA CAGGTTTTAC
AGTATTTTTG CCCTGGTTTT GGTATTAATT ATAATCTTAA TGCAGAAAGA TTTTGGCCCC
ATGTTTAAGG CTGAAGTAAG GGCCCGGAAG ACCGGGAAAG TTTTAAGGGA TGGGGCTGTT
CCCATGGTGG CAAAAGAACT GACTGACATG GAGATTGCGG AAAATAAAGA TCTGGACTGG
TTTATTGATG CTTTTCTCCC CATTATTAGT GTTATTGTTA TTACCCTGGT TGGATTATGG
TACAACGGTG GGGGACCCAG TGGACTTACA ATTCGCCAGG CCTTTGGTAA TGCTGATGCC
AGTGTGGCTC TGGTCTGGGC CTCCTTTGGT GGTAGTATCA TTGCCGGGAT AATCGCTTTA
TTGAGGGGAA GCCTTTCAAT ATCAGGAGTA GTTAAAGGCT GGGTTGAAGG TGCTAAATCC
ATGGTTTTTG CTACATTTAT TCTGGTTCTG GCCTGGTCTT TAAATAGTGT AACTGATGGA
CTGGGTACTG CCAATTACCT GGTGGGCATT ACCAGGGAAG TTATTTCACC ATTCCTGGTG
CCCCTGATAG TTTTTATCGT TTCAGCCTTT ATTGCTTTTG CTACCGGGAC TTCCTGGGGT
ACAAACGCCG TTGTTATGCC CCTTGCCGTA CCTCTGGCCT ATAGTCTTGG TATTCCTTTT
GTGCCAACCA TCGGGGCTGT ATTAACCGGG GCGGTAGTTG GAGACCATTG TTCTCCCATA
TCTGATACTA CCATCATGTC TTCAACAGCT TCTGGCTCCG ACCATCTTGA CCATGTTAAG
ACCCAGCTTC CTTACGCCCT GACAGGGGCT TTAGTGGCAG GATTGTTTGG ATTTATTCCA
GCCGGCCTTG GTGTATCTGC CTATATATCT CTACCGCTGG GTGTAGTGGC TTTAATACTT
ATCGTTTATT TCTTCGGAAA GAGTGTTAAA GAAGAAGATA TTGAGGACCT TGTTTTAGAA
GAATAG
 
Protein sequence
MDSYGFLSLL PPLLAIILAW WTKEVILSLL IGIFAGATIL ANNNPLIGFL RTFDKYIVSS 
VADSWNAAVL IFLIAIGGMI GIITNAGGVA AIGDYIARKA RSVKTTQFAT WLMGIAIFFD
DYANSLIVGN TMRPITDRMK ISREKLAYIV DATAAPITSM ALVSTWVAYE MGLIKDALDK
INLDTNVYTI FIKSIPYRFY SIFALVLVLI IILMQKDFGP MFKAEVRARK TGKVLRDGAV
PMVAKELTDM EIAENKDLDW FIDAFLPIIS VIVITLVGLW YNGGGPSGLT IRQAFGNADA
SVALVWASFG GSIIAGIIAL LRGSLSISGV VKGWVEGAKS MVFATFILVL AWSLNSVTDG
LGTANYLVGI TREVISPFLV PLIVFIVSAF IAFATGTSWG TNAVVMPLAV PLAYSLGIPF
VPTIGAVLTG AVVGDHCSPI SDTTIMSSTA SGSDHLDHVK TQLPYALTGA LVAGLFGFIP
AGLGVSAYIS LPLGVVALIL IVYFFGKSVK EEDIEDLVLE E