Gene Hore_19110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19110 
Symbol 
ID7312726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2043759 
End bp2044247 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content40% 
IMG OID643612358 
ProductGAF domain-containing protein 
Protein accessionYP_002509654 
Protein GI220932746 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00000206028 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCAGA AAGAAGAAAA ACTCAGGGAA ATAAATGAGA AGCTGGAATA TTTAATTGGT 
AATGAAAGGG ACTGGCTTGC CAACCTGGCC AATGCAGCAG CCCTTTTATA TAATGAGCTT
GATGAAGTAA ACTGGGCCGG GTTTTATCTA ATGCGCGGTG GTGAACTTGT CCTGGGCCCT
TTTCAGGGAC TACCGGCCTG TGTTAGAATT AAAGTAGGAA GGGGAGTTTG TGGTTCAGCA
GTCAGGGATA GAAAAACATA TCTAGTACCT GATGTTCATA AATTTCCCGG CCATATTGCC
TGTGACGAGG CTTCAAGGTC AGAAATAGTT ATTCCTGTTG AGGTAGATGG AGATATAATC
GGGGTTCTGG ATATAGATAG CCCGGTTAAA AATCGTTTTG ATGAAATCGA CAAGAGGTAT
TTAGAAGAAT TTGTGAAAAA AATAATTAAC TTATCAGATT TTATTGACCT GGAAATAGAT
AAAGTATAG
 
Protein sequence
MEQKEEKLRE INEKLEYLIG NERDWLANLA NAAALLYNEL DEVNWAGFYL MRGGELVLGP 
FQGLPACVRI KVGRGVCGSA VRDRKTYLVP DVHKFPGHIA CDEASRSEIV IPVEVDGDII
GVLDIDSPVK NRFDEIDKRY LEEFVKKIIN LSDFIDLEID KV