Gene Hore_18900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_18900 
Symbol 
ID7312705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2020309 
End bp2021178 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content44% 
IMG OID643612337 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_002509633 
Protein GI220932725 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0770167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAGA ATATTATACT CTATTTGGTC TTTGAAGGTT TTTTACTATT TATCAGAATA 
TTACCCGGTT TTTTACGCCA GATGGTGGGT CTTTTTTTCG GTAAGGTTCT TTATTATCTA
CCGGGAAACC GTAAAAAAGT GGCTTATAAT AATTTGAAAA TGGCTTTCGA TGATTTATCA
GATGACAGGA TAAAGGAAAT CATCAGGAAG GTTTATATAA ACCTGGGGTT TATGCTGGTC
GAATATGCTC TGACCCCGGG ACTTAATAAG GATAATATGA CTAAACATAT TGAGCTGGAA
GGGGAAGAGC ACCTGAAAAA GGCCTTTGAC CGGGGAAAAG GTGTTATTGT CTACGGTGCC
CATTTTGGTA ACTGGGAATG GATGGGGATT GCCATCTCCC TTATGGGGTA TCCCATGGCT
GCCATTGTCC AGGAACAGAA TAACTCCTAT TTTGACAGAA GGATTAACCA GATGAGACAG
CAAAAGGGAG TTGAGACCAT ACAGAGAGGG ATGTCGGTCC GGAAGGCCTT TAAGGCCCTG
AAAGAGGGTA AATGTCTTCT TATCCTCGGT GACCAGGATG CCAGGAGCCG GGGCTGGAGA
TTAAAATTTT TCGGGAAAAC GGCCTCTACA TTTCCCGGGG CTGTACAGCT GGCCAGAAGG
ACAGGGGCCC TGATTGTTCC TGCCTTTATG GTCCGGAAAT CCCGGGGGAA GCACAGATTG
AAGTTTTACC GGCCCATTGA AATAGGGGCT GAGGCTTCCA TGGAAGAACA GAAAGAGTTT
TTACAGGAGT TAAATCATAT TACAGAATCG GTTATAAAAA AATATCCCGA CCACTGGCTA
TGGCTACACC GTCGCTGGAA AACTTATTAA
 
Protein sequence
MVKNIILYLV FEGFLLFIRI LPGFLRQMVG LFFGKVLYYL PGNRKKVAYN NLKMAFDDLS 
DDRIKEIIRK VYINLGFMLV EYALTPGLNK DNMTKHIELE GEEHLKKAFD RGKGVIVYGA
HFGNWEWMGI AISLMGYPMA AIVQEQNNSY FDRRINQMRQ QKGVETIQRG MSVRKAFKAL
KEGKCLLILG DQDARSRGWR LKFFGKTAST FPGAVQLARR TGALIVPAFM VRKSRGKHRL
KFYRPIEIGA EASMEEQKEF LQELNHITES VIKKYPDHWL WLHRRWKTY