Gene Hore_18750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_18750 
Symbol 
ID7312689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2003535 
End bp2004287 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content43% 
IMG OID643612322 
ProductABC transporter related 
Protein accessionYP_002509619 
Protein GI220932711 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000378719 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAC CGGTTTTACA GGTTAATAAC CTCAAAAAAA GCTATGGTTC CCATCTGGTT 
CTCGATGGTA TTTCTTTTTC CCTGAATAAA GGGGAGACCA AGGTTATAAT TGGACCCAGT
GGTACAGGGA AAAGTACCCT TTTAACCTGT ATCAATATGT TAACTCCAGC TGATTCAGGG
GAGATTTTCC TGGAAGGTAC CAGAGTAACT CAGGAAAATA TAGATAAGGT GAGACAGCAG
ATAGGGTTTG TCTTTCAGGA GTTTAATTTA TTTAATCATC TGACAGCCCT GGGGAATGTT
ATGCTGGGGC TAACAAGGGT TCAGAAAATG AAAAAAGAAA AAGCCAGAAA GGTTGCTTTA
AAATGTCTTG ATGATGTAGG TCTTAAGGAT AAGGCTGACC TTTATCCGGC CCAGCTATCT
GGTGGTCAAA AACAACGGGT GGGTATAGCC CGTGCCCTTG CCATGAATCC TAAATTACTC
CTGTTTGATG AACCTACTTC GGCTCTGGAT CCCGAACTGA TCGGGGAAGT TCTTGCTGTT
ATGAAAAAGC TGGCCAGCCA GGGGATGACC ATGCTGGTGG TTACCCATGA ACTTGGTTTT
GCCAGGTCTG TATCTGATGA AATTATCTTC ATGGAACACG GGGAGATTAT TGAACAGGGG
CCTCCCGAAC AAATATTTAA TAACCCCAGT ATTACACGAA CTGGAGATTT CCTGGGAAAT
ATAACCACAA TGTATAATGG GGATGGTGGA TAA
 
Protein sequence
MKTPVLQVNN LKKSYGSHLV LDGISFSLNK GETKVIIGPS GTGKSTLLTC INMLTPADSG 
EIFLEGTRVT QENIDKVRQQ IGFVFQEFNL FNHLTALGNV MLGLTRVQKM KKEKARKVAL
KCLDDVGLKD KADLYPAQLS GGQKQRVGIA RALAMNPKLL LFDEPTSALD PELIGEVLAV
MKKLASQGMT MLVVTHELGF ARSVSDEIIF MEHGEIIEQG PPEQIFNNPS ITRTGDFLGN
ITTMYNGDGG