Gene Hore_18550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_18550 
Symbol 
ID7313853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1979637 
End bp1980314 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content38% 
IMG OID643612302 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_002509599 
Protein GI220932691 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3409] Putative peptidoglycan-binding domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGTG GGGATGATGT AGAACAGGTA CAAACCTTTT TAAACCAACA GGGGTATGAT 
GTAACAGTTG ATGGTATATT GGGCCCTGAG ACGGCAGGGG CAGTTAGAGA CTACCAGGAA 
GATAAAGGTT TATCTGTAGA TGGTGTTGTA GGGCCCAATA CCCGGGAAGA GATAAAAAAG 
GATCTGGGGA TAGAGGATGT TAGGCATGAA ATATATTTTC ACGATACAGA GAAAGTTTAC 
TGGACAGATA ATACCGGAAA AATTATAAAA TCATGGCAAG CTAGTGATGA TATTATAGGA 
GGAAAGAATC GAGAAGGGGA AACAAGAGAA TCATTACCTG CGGGAGAATA TATTGCAACA 
GGATATATGA CCGGTATTAA TTATGGTAGA GCTTACGGTA CAGGTTATAT AGATACAGGA 
GATTCTCGTG GCAGAGATAT TCACGGTGGT GGGTCAAGAT TGACTTCAAA AGATGAAGTA 
GCTCAAGATT TTGTCAATAA AGTAGGGGCA TATGCGCCAC GGCAAGAATT ACTACCAACA 
TATGGATGTA TAAGAATGCA TAATGAGGAT GTGGAAGAAT TATGTAACTT GATTAGCGAT 
GAAGGAAACA ATATTCCTTT ACATGTATCT GAAACAATAG AGATTAATGA TGATAAAATA 
ATTAATTATA CTCAATAA
 
Protein sequence
MMRGDDVEQV QTFLNQQGYD VTVDGILGPE TAGAVRDYQE DKGLSVDGVV GPNTREEIKK 
DLGIEDVRHE IYFHDTEKVY WTDNTGKIIK SWQASDDIIG GKNREGETRE SLPAGEYIAT 
GYMTGINYGR AYGTGYIDTG DSRGRDIHGG GSRLTSKDEV AQDFVNKVGA YAPRQELLPT 
YGCIRMHNED VEELCNLISD EGNNIPLHVS ETIEINDDKI INYTQ