Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_18490 |
Symbol | |
ID | 7313847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1973825 |
End bp | 1975153 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643612296 |
Product | MATE efflux family protein |
Protein accession | YP_002509593 |
Protein GI | 220932685 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000174233 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA GAAAAAGCCT GTTTCAATTA GCTGTACCTA TATTTATTGA GACCCTCCTG TTTATGTTGT TGGGTATAGC TGATATTTTT ATGCTAAGTC AATTTGATGA CAGGGCTGCT GGGGCTGTTG GGGCTTCTAA CCAGGTAATA GGAAATTTAA ATTTAATTTT TGCCATAATT TCAGCAGGTA CAGCAGTTTT AGTGGCCCAG AATGTGGGAG CAAAAAATAA AAGGGAAATA GAGAGGGTAT GTTCTATCTC CCTGGTTATG AATTTTGTCA TTGGTCTTTT AGTTAGTATT ACCATGATAT TCTTTGGTGA TGTGATACTG ACTAAAATGG GTGTTACCCG GAGTCTAATG GGGTATGCAT CTAATTATAT AAAGATTGTC GGTGGGGCCT TATTTGTTCA GTCAATATTA AATACTGTTA CTGTAATCAT CAGGAGCCAT GGCTATACCA GGGAAAGTAT GTTAATAACA GTCGGGATGA ATATTTTAAA TATCTTTGGT GATGCTGTTT TTATCTTTGG CCTGTTTGGG GCTCCGGTAC TGGGTGTTAA AGGGGTCGCT ATTGCTACTA CTGTAAGTAG AATACTGGCT ACGATTATAG CATTTATATT TTTGTTCAAG GGGCTGGTAC CAGTTAGTAT GTTTAAATAT TTATATGATA AACCTGTAGG TACTTTTAAA AAACTAATAA AAATTGGCTT CCCATCTGCT ATGGAGAATA TGTCTTATTC CCTAGCCCAA ACAGTAATAA TGAGTATTAT ATTATTAAAT TTAGGGGAAC AGGCCTATAT TGCCAGGACT TATATCTGGA CATTGAGCTG GTTTGTGGTC TTGTTTTCAA TTTCTATCGG GCAGGCCAAC CAGATTATGA TTGGCCAGTT AACCGGGGCT GGTAAAGTGG AAGAGGCCTA TCATACCGGG CTTAATAACT TTAAAACAGC TATGTTATTT TCAGTTCTTG GGGGAATAGC TTTAATAATT TTTAGAAGAA AGTTAATAGG TATTTATACT GATAACCAGG ATATTATTTT GATAGGGTCA ATTACCCTGA TAGTGGATGC TTTCCTTGAA CCCGGTAGAA CCTTTAATAT TGTCCTTATT AATGGTTTAA GGGGGGCAGG AGATGTTATT TTTCCCGTTG TTATGGCCAT TATAAGTATG TGGGGTCTTG GCGTTACAAC TGCATACTAT TTTGGTGTTG TTCTGGGACT GGGTCTTCCC GGTATCTGGA TGGGTTTAAT ACTTGATGAG TGGTTCCGCG GGGTCTGCAT GTTATTCAGG TGGCGAGGGA AAAAATGGGT AAGAAAAGTG ATGGTGTAG
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Protein sequence | MEKRKSLFQL AVPIFIETLL FMLLGIADIF MLSQFDDRAA GAVGASNQVI GNLNLIFAII SAGTAVLVAQ NVGAKNKREI ERVCSISLVM NFVIGLLVSI TMIFFGDVIL TKMGVTRSLM GYASNYIKIV GGALFVQSIL NTVTVIIRSH GYTRESMLIT VGMNILNIFG DAVFIFGLFG APVLGVKGVA IATTVSRILA TIIAFIFLFK GLVPVSMFKY LYDKPVGTFK KLIKIGFPSA MENMSYSLAQ TVIMSIILLN LGEQAYIART YIWTLSWFVV LFSISIGQAN QIMIGQLTGA GKVEEAYHTG LNNFKTAMLF SVLGGIALII FRRKLIGIYT DNQDIILIGS ITLIVDAFLE PGRTFNIVLI NGLRGAGDVI FPVVMAIISM WGLGVTTAYY FGVVLGLGLP GIWMGLILDE WFRGVCMLFR WRGKKWVRKV MV
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