Gene Hore_18350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_18350 
Symbol 
ID7313833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1960991 
End bp1961917 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content38% 
IMG OID643612282 
Productperiplasmic solute binding protein 
Protein accessionYP_002509579 
Protein GI220932671 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000303257 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAAAA TATATATACT GGTATTTCTG GTTATTATAT TCTTCCCTGT ACTGTTTATA 
GGTTTAAAAG GGGACGAGCG ATCTGGTGTA GTGAGTGATA AACTGAAAGT AATAACCAGT
GTTAATATCC TGGAAGATTT TGTTAAAGAG ATCGGGGGGG AAAAAGTCGA GGTTGAGAGT
TTAATAACCG GACTTGAAAC TCCCCATACC TTTAGTATGT CTCCGGGGGA TAGAAAAAAA
CTTATGGAAG CAGATATGAT AGTAACCATC GGCATGGGGC TGGAAGTATG GATTGATGAC
ATTTTAAAGG AAATAGCCTC TGAAAAGATT ATAGTTACAA CTTCCAGGGT GCCGGGAATA
AAGGTTATTG GTGGTAGTGT AGATGATGAA CATGGCCATG ATAATCATAA TCATGGAAAC
CCCCATATCT GGTTAAATCC GGACAATGCC AGGTTAATGA TAACTGCTAT TAAGGATAGT
TTGATTAAAG CTGATCCTGT AAATAAGGAA TATTATACAA AGAATTATAA ATATTACTTA
TCTGAACTTA ATACTGAAAT ATTAGAGCTG AAAAACAGGG TAGCCAGACT TGATGACCGC
CGTGTTTTTT CATATGCAGC AGCCTTCCCC TACCTGCTGG ATTATTTTGG ATTTGAAACA
CCTCTCCCTT CCCGGGTGGT ACCGGGGCAG GATATTTCAG CCCGGGAAAT AACGTCTTTA
ATAAAACAGC TAAAAAAAGA AGATATTGAA GTAATTATTG AAGCCAGACA ATCGGGGAGT
AAGATAGCTG AAACTTTAGC CCGGGAAACC GGAGGAAAAG TTGTGTACCT GACTCCATTA
CTGATACCTG AAATAATTCC AGAAACCGGT AGTTATAAAG GACTTATCAG GTACAATATA
GAAACTATTA TTAATGTCTT AAAATAA
 
Protein sequence
MKKIYILVFL VIIFFPVLFI GLKGDERSGV VSDKLKVITS VNILEDFVKE IGGEKVEVES 
LITGLETPHT FSMSPGDRKK LMEADMIVTI GMGLEVWIDD ILKEIASEKI IVTTSRVPGI
KVIGGSVDDE HGHDNHNHGN PHIWLNPDNA RLMITAIKDS LIKADPVNKE YYTKNYKYYL
SELNTEILEL KNRVARLDDR RVFSYAAAFP YLLDYFGFET PLPSRVVPGQ DISAREITSL
IKQLKKEDIE VIIEARQSGS KIAETLARET GGKVVYLTPL LIPEIIPETG SYKGLIRYNI
ETIINVLK