Gene Hore_18190 details

Gene Information

• Locus tag: Hore_18190
• ID: 7313817
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: +
• Start bp: 1942091
• End bp: 1942768
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643612266
• Product: cytochrome c biogenesis protein transmembrane region
• Protein accession: YP_002509563
• Protein GI: 220932655
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0785] Cytochrome c biogenesis protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00000000578008
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCTG GTGTGAATTT TGTTATTGCT TTTTCAGCAG GGGTTCTATC ATTTTTGTCC 
CCCTGTGTCC TGCCACTGAT ACCATCTTAT GTCACTCTGC TGCTCGGTGA CTATGCAGAA 
AAAAAAGGGG AAAACCGGCC CCTGACACCG GCCCTCATTT TTATCCTCGG GTTTACCATA 
GTTTTTATGA CCCTCGGTAT GTCAGCTTCA TTACTCGGTA AAGTCTTGAT ACAAAATCAA 
ATTATTCTGA GGAAGGTAAG TGGGGTAATA ATTATCATCC TCGGGCTCCA CCTCTCCGGT 
ATCCTGAAGA TTAAGACCCT GTACCGGGAA AAAACCTGGC ATTTTGGCCA GAACCTTAAT 
AAATACTTGA GGGCTCTGGT TATGGGAATC GGTCTGGCCC TGGCCTGGAC CCCCTGTATC 
GGACCGGTTT TATCCTCAAT CCTCATTTAT GCAAGTACCA GCAGTACCAT TCTCCAGGGA 
GGAATGCTCC TGTTCTTTTA TTCAGCCGGG TTTGCCATAC CCTTTATATT GACAGCAGTT 
TTCTTTAACT GGCTTTTACC CCGGTATAAA AAACTAAACC CATACCTCCC CACCATCCAG 
ACCATAACCG GTATTTTAAT AATTATCCTG GGTATCTTAA TATACACAAA CTATATCCAG 
GTTTTAAGCC AGATATAA 

 

Protein sequence

MNSGVNFVIA FSAGVLSFLS PCVLPLIPSY VTLLLGDYAE KKGENRPLTP ALIFILGFTI 
VFMTLGMSAS LLGKVLIQNQ IILRKVSGVI IIILGLHLSG ILKIKTLYRE KTWHFGQNLN 
KYLRALVMGI GLALAWTPCI GPVLSSILIY ASTSSTILQG GMLLFFYSAG FAIPFILTAV 
FFNWLLPRYK KLNPYLPTIQ TITGILIIIL GILIYTNYIQ VLSQI