Gene Hore_17970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17970 
Symbol 
ID7313795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1921607 
End bp1922683 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content43% 
IMG OID643612244 
Productpeptide chain release factor 1 
Protein accessionYP_002509541 
Protein GI220932633 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000477535 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATT TAACGAAAAA ACTTGATAAA TTAGTCGATA GATATAATGA ACTTAACAAA 
GAAATCAGTG ACCCTGATGT TATTAATAAC AGTGAACAGT ATCAAAAACT TCTCAAAGAA
CATGGTAAAT TAAAAGAGAT TGTCAGCAAA TACAGGGAGT ACAAAAAGGT GCTAAGCCGG
GTTGAAGAAG CCCACTCCAT TATTGAAGAG GAAGAGGAGC AGGAAGTTAG AGAACTGGCT
GAAATGGAGC TTAAGGAATT AACCCCGCGC AAGGAGAAAA TGGAAGATGA GCTTACCTAT
ATGTTGCTAC CTGAAGACCC CAATGATGAA AAAAATGTTA TTGTTGAAAT CAGGGCCGGG
GCCGGAGGAG ACGAAGCCGG CCTTTTTGCT GCTGACCTTT ACCGGATGTA TTCCCGGTAT
GCTGAAAGCA AAAACTGGAA AACAGAAGTT ATAAGTGCCA ATGCTTCTGG AATAGGCGGG
TATAAGGAGA TTATATTTAC GGTTGAAGGA AAAAATGTAT ACAGCCGTCT TAAATATGAA
AGTGGGGTGC ACCGGGTTCA GAGGGTTCCG ACCACTGAAT CTGGAGGCCG GATTCATACA
TCTACAGCCA CTGTTGCCGT TCTACCTGAG GCTGAAGAGG TTGATGTAGA TATTGACCCC
AATGATTTAC GGATAGATGT TTACAGGTCA AGTGGCCCCG GAGGGCAGAG TGTTAATACT
ACTGACTCTG CCGTGCGGAT AACCCATGAA CCGACAGGGC TGGTTGTATC CTGTCAGGAT
GAAAAATCAC AGCATAAGAA CAAAGCCAGG GCCATGCGTA TTCTACGGGC ACGGCTCAAG
GAGTTAATGG AAAAAGAAAA GCAGGCGGAA ATTGATGAAG CCCGGAAAAG CCAGATCGGC
TCCGGGGACC GCAGTGAGAA AATCAGGACC TATAATTTCC CCCAGGGACG GGTCAGTGAC
CACAGAATCA ATTTGACCAT TCATCAATTG AATGATATTC TGGACGGAAA CCTGGATCTT
ATTATTGATA ATTTAATTAA AGAAGATACT ATTAAAAGAT TGGAGAAGCT AAAATAG
 
Protein sequence
MFDLTKKLDK LVDRYNELNK EISDPDVINN SEQYQKLLKE HGKLKEIVSK YREYKKVLSR 
VEEAHSIIEE EEEQEVRELA EMELKELTPR KEKMEDELTY MLLPEDPNDE KNVIVEIRAG
AGGDEAGLFA ADLYRMYSRY AESKNWKTEV ISANASGIGG YKEIIFTVEG KNVYSRLKYE
SGVHRVQRVP TTESGGRIHT STATVAVLPE AEEVDVDIDP NDLRIDVYRS SGPGGQSVNT
TDSAVRITHE PTGLVVSCQD EKSQHKNKAR AMRILRARLK ELMEKEKQAE IDEARKSQIG
SGDRSEKIRT YNFPQGRVSD HRINLTIHQL NDILDGNLDL IIDNLIKEDT IKRLEKLK