| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_17960 |
|---|
| Symbol | |
|---|
| ID | 7313794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1920750 |
|---|
| End bp | 1921607 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643612243 |
|---|
| Product | modification methylase, HemK family |
|---|
| Protein accession | YP_002509540 |
|---|
| Protein GI | 220932632 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000000857444 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGTAA AAGAGGTATT AAACAGTGCT ATTGATTTTT TTAAAAAGCA GAATATAGAT
AATCCCCGGC TTGATGCTGA AGTCCTTCTG GCTCATCTCC TTGATATGGA ACGGATTCAG
CTTTATGTTA AATATGATTT ACCGCTAAAA AATAAAGAAG TTGAAGCTTA CCGGGAGATG
GTTATTAACC GGGCCAGGGG GATACCTGTT GCCTATCTAA CAGGACACAA AGAATTTATG
TCCCTTGATT TTAAAGTGAA CAGGAGTGTT TTAATACCCA GACCGGAGAC CGAGATTCTG
GTGGAAGAGA TAATTTCACT CTGTCAGGCA AAAAATATTG ATAATCCCAA TATCGTTGAT
GTAGGAACGG GGAGCGGGGT TATAGCTGTC AGCCTTGCTC ACTATCTCCC CGGAGCCCGG
GTTCTGGGGA TTGATATATC CGATAAGGCT CTGGAAGTGG CCCGGACCAA CATCAAGAGG
CATAATCTAG GGGAGAGGGT CAAGGTTATT AAGGGTAATT TACTTGATCC TTTAATTAAA
ATGGAAAAGG ATAATGTTAA TATAGTTGTC TCCAATCCCC CTTACCTGAC CGGAAATGAA
ATGAAAAAAC TGCCGCTGGA AGTTACCTAT GAGCCTTCAC AGGCCCTTGA TGGAGGGGCT
GATGGCTTAA AGATTTACCG GGAGTTAATC CCGCGGGCTT TGAAAGTACT TGTCCCGGGA
GGTATTTTAG GACTGGAGAT AGGTTACCAT CAGGCCGACA GTATCAGGGA TATTTTGTCA
GGCCTGCCCT GGGGTGATAT CAGGGTTTTA CAGGATTATT CTGGCCTGGA CCGGGTTGTT
ATTGCCCGCA AAAAATAA
|
|---|
| Protein sequence | MTVKEVLNSA IDFFKKQNID NPRLDAEVLL AHLLDMERIQ LYVKYDLPLK NKEVEAYREM
VINRARGIPV AYLTGHKEFM SLDFKVNRSV LIPRPETEIL VEEIISLCQA KNIDNPNIVD
VGTGSGVIAV SLAHYLPGAR VLGIDISDKA LEVARTNIKR HNLGERVKVI KGNLLDPLIK
MEKDNVNIVV SNPPYLTGNE MKKLPLEVTY EPSQALDGGA DGLKIYRELI PRALKVLVPG
GILGLEIGYH QADSIRDILS GLPWGDIRVL QDYSGLDRVV IARKK
|
|---|
| |