Gene Hore_17900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17900 
Symbol 
ID7313788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1914861 
End bp1915982 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content42% 
IMG OID643612237 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_002509534 
Protein GI220932626 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTA AGACAGTAAC TATTTTCGGC ACGAGACCGG AAGCAATAAA AATGGCCCCT 
GTTGTTAAGG CTCTACAGGA AAGTGAAAAT ATTGAAAATA AAATACTGGT CACTGCCCAG 
CACCGGGAGA TGCTAGATCA GGTTTTAAGG CTTTTTCAGC TTAAACCTGA TTTTGATTTA 
GATATAATGA AACATAAACA GAGCCTGACC CATATTATGG CAAAGGCCCT TGAAGGAATC 
GAGAAGGTGT TGACTGAAGT AACCCCTGAT TTAGTCCTTG TCCATGGGGA TACCTCGACA 
ACTCTGGCCG GAGCCCTGGC AGCCTACTAT CAGAAAATAC CCGTTGGCCA TGTTGAGGCT 
GGATTAAGGA CCTATGACAA ATACCAGCCC TTTCCTGAAG AATTAAACCG TCATCTTACC 
GGTGTAATTG CTGACCTTCA TTTTGCCCCG ACCGGGAAAG CGAAAAATTT TCTTCTGAAT 
GAAGGGGTAG ATGAAGGTAG TATTTTTGTT ACCGGTAATA CTGTGATTGA TGCATTATTA 
TATACGGCAA ATATAGACTA CACCTTTGAG GATCCTGTTC TTAAAGAATT TGATTTTGAC 
AGGGGTCCTG TGATGTTATT AACCGCCCAC CGGCGGGAAA ACTGGGGACA ACCTTTAGAG 
GATATATGTT ATGCCGTTAA AGAATTGGTG GAAAACAATT CTGACCTCAG AGTAATATAC 
CCGGTTCATT TAAATCCCCG TGTCCGGGAA GTAGTTTTTT CAATTCTGGG TGGGCATAAC 
CGTATTTTAC TGATAGAACC TCTGGATTAC CTCCCCTTTG TTCATTTAAT GAAGTCTGTT 
GATATCGTCT TAACAGATTC AGGGGGGATT CAGGAAGAGG CTCCGTCCCT TAATAAACCG 
GTCCTGGTCC TGAGAAATGT TACCGAACGT CCTGAGGCTG TAGAAGCGGG AACGGTTAAA 
GTAGTCGGGA CAGACAGGGA AAAAATATAT AATGAGGTAT CATGTTTATT AAATAATAAA 
GATGAGTATA ATAAGATTGC CCTGGCCAAA AATCCCTTCG GTGATGGTAA AGCAGCCGGA 
AGAATAGTAA AGATTATTGA AGACTACTTC CGTAAAAGCT AA
 
Protein sequence
MEIKTVTIFG TRPEAIKMAP VVKALQESEN IENKILVTAQ HREMLDQVLR LFQLKPDFDL 
DIMKHKQSLT HIMAKALEGI EKVLTEVTPD LVLVHGDTST TLAGALAAYY QKIPVGHVEA 
GLRTYDKYQP FPEELNRHLT GVIADLHFAP TGKAKNFLLN EGVDEGSIFV TGNTVIDALL 
YTANIDYTFE DPVLKEFDFD RGPVMLLTAH RRENWGQPLE DICYAVKELV ENNSDLRVIY 
PVHLNPRVRE VVFSILGGHN RILLIEPLDY LPFVHLMKSV DIVLTDSGGI QEEAPSLNKP 
VLVLRNVTER PEAVEAGTVK VVGTDREKIY NEVSCLLNNK DEYNKIALAK NPFGDGKAAG 
RIVKIIEDYF RKS