| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_17710 |
|---|
| Symbol | |
|---|
| ID | 7313693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1894964 |
|---|
| End bp | 1899256 |
|---|
| Gene Length | 4293 bp |
|---|
| Protein Length | 1430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643612218 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002509515 |
|---|
| Protein GI | 220932607 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAA AGTTTTCCCT TAAGACAAAG AAACGTTATC TATTTATATT ACTTATATCT
GTTTTTATAT TAAGTGTAAT AATAATACAG GGGAACCGGA TTCTGACAAT AGCAAGACAT
GAGCTTATTT TTTATATTGA AAATACCTTT CCTCAGGTTA ACAGGTTAGA GGTTAATAAT
ATCAGTATCT GGCCTTTAAA TCAATTAACT CTGGAAGGGG TAATGATTGA GACTAAAGAT
GGAAGTTTAT CAATAAAAGC ACCCCGGGTC AGGGTTTACT ATAATTTGAT GGGTATTTTA
TTTAATAGAG ATAACTGGAT TGGTAATATT AAGCTGGTAT CATTAAAAGA CCCGGTTTTA
AGGTTTAGTA ATTTTGAAGC CCCCTCAGAT TCTATTGATC AAACCGGGGA TTTAAAGGGA
TTTACAATTC CCTTTTTTCC TGTAGAAATT AAAAATGGAA CTGTTGTCGC TATAAATAAA
GACCAGAAAA TTGAGTTGGG TAATACTTAC CTGGTTTTAA AGGAAGCGGG GAAATCCGGT
ACAATTTTGT TGAAGTCAGA TGTAAGTCTT GAGGGAATAC AATATAATAA TTATAAAGTG
GAACAGGTCA GGATTAATAA CCTGGAAGCA GGGATTAAAT ACAGCCAGGA TAACTGGGAA
GTAAATCTGA GAACAGGTCA ATTTGAACTG AAAAGCCTTG AGGGTATTTT CAGGGAGTTA
AATTTGCCAG TCGCGGTTCA GACCATTGAT AGTAAGGGAA AATTGACCTT AAATTTAGAG
GGTAACACCA GTCAGATTAC TGATTATAAA GGAAAACTGG AGTTAAATCA GGGCCAGGTC
GGACTAGAGT CTGAATACCT GACAGAAAAC AGACTGTCGT CTATACAGGG GATAATATTA
TTAGATTCAG GGCAAAAGCA GGTGGTTGTT GAGAAACTTA AATTTGATCT GGCCGGTAAT
CCCTATACAT TTAAAGGAGA GCTTAACCAT AAAGAAAAAA TCCCCAGGAT TTATGGTCAC
CTGGTATCAG AAGGAGTTAA CCTCTCTCGG ACTGGTTTTA ATATCCCTGC TATAAATATG
TCAGGACAGG CCCACCTGGA TATTACAGTT CTGGGGCGGA TGACCTCCCC GGAAGTATTA
ACTGATATTT ATGTGACTGA AGGAGAATTC CAGAACTATG AGATCGGGGA GTTAGCTGCC
GAATTAAGAT ATAAAGATAA TATAATTTAT ATTGATTCAC TTGAAGGTAA TTTCCAGGAT
AATAATTCTA TTTCGGTAAG GGGAGTATAT GATCTGGCTA CCAGTTTATA TAGTTTCAAC
CTCAAAGGTA CAGATATAAG AATTGCCTTT ATAAAACAAA ATTTTCCACA ATTGAATTTA
CCTTTATCAC AGGGGCAGCT AAATAGCAGG TTGATAATAA GCGGCCAGGG CAACACCCTG
ACCGGATCCG ATATAACCGG TTATATTGAA GTAATAAACC CTCAATACAG GGATATACTC
ATGGATAGGG TTTTTGCTGA ATTATGGTAT AACGGGGGTA ACCTTATTTT AAATGAGGGA
AAGCTGGAAG CGCAATATGG CGATATCTTT TTTCAGGGAA AAGTTAATAT AGCGACCTCC
AGGGTTGAGC TTGAATACAG TGGTTCAAAA ATAAATAGTA AAGTTATACA AAATCTGCTG
GATGTAAAGG TGCTGGAAGA CCTCGCCGGT TTTGTAAATA TTAATGGGAG CATCAAGAAT
AATCTTGAAA ATCCCTTTAT TACCATGGAC TTATCTTCGA ACAGGGTTTG TCTGTATAAT
AAGGTCTTTC AAAATTTTAA TACTTCTATG GAGTATAGAA AGGGTTCTCT GTATATTAAC
CGTTTAAAGA CTGTACTTGA AAATGCAGAA ATAAACGGAC AGGGTGTTAT TAATTTTGCA
GCCAGTGAAC CGGTGATTAA AACCAGTGTT TCCATTAAAA AATTGGGCTA TGATTTCTTC
CAGGGAATAA GTGGCCATAA ACTACCGGTA ACCGGTAATC TTAATGCAGA ACTTAAAATC
AGAGGGCCTT TAGCTAATCC AGAGCTAACG GGTTATGTAA GTAGTAATAA TCCAGTAATT
AACTACAATA ACAGAGACGT TAAAATAAAC ACGGCAAAAT TTAAGCTTAA ATTGTTGAAA
AACAATACTT TTTATATAGA AGATGGGGTA GTGGTAAAAG ATGACTCCCG GGTAAAAGTG
GCCGGTACCA TAAACCCTGT TACCAGACAG TTAAATCTGA AGTATATAAT AGATAACCTT
AACCTTGATG ATGTTTACCC TGACCTTGAG GTTGACGGTT CTTTTAACCT GACAGGTAAT
ATTAAAGGCT TATTTGAAGC ACCTGATATT TCAGGGGAAA TTTGGCCGGG AAGTTTGGTC
TATAAGGGAA AAGAAATAAA AAATATAGAA GGTAATTATC ATTACAGTAA CGGTAAATTG
ACGCTGGAAG GTTCGTCGTT TAAGGTAGGT CGAAGTAAAT ATAACCTCTC AGGAATGGTA
GAATACCCTT TTTTAGATGT AACCCTGGAG ACCAGGGAGG GGAGATTATC TGACCTTACT
CCCTTTTTAA CCAGTAAGGT TTCTATACCT GAGGATTATT ATCTCAGAGG GAGGATAAGG
TTAACGGGGC AGTTCAGGAA ACTCAGGTCA GCGGTTGACC TTGAGGTTTT TAGCTCTGAT
GTCAAAGGAG ATAAATTAAA AATTTCAGGG AGTATCGGTG ATAAATTTAA TATTACCCTG
GATGGTGACC GTGTCAATCT GGGTAAGATA ATCAGTTTTC TGGGGAGTAA TGTTAATATT
GACGGACAGG TTGATTTTAA CGGTAACCTG ACCGGTGATA TTAATGACTA TCTCCTGGCC
CTCAATATAA ATATAGATGA AGCCATGGTT AATGAATTTA AAATAAATAA TATAAATGGG
GAAGTTAAGT TAACCCCGGA ACGGGTTTAT TTGAATCAGA CGGCTTTATT ACCGGAAGAT
AGTAGTATTG ATGTTGATGG TTTTATACCC TTTAATAAAA ATGAGAAAAT AGACCTTTAT
CTCGGTGTTA ATGGGGTTTA TCTTCCTATT ATATCCTCAG CTATTCCTGA TTTACCTGAT
CTCGAAGGAT ATGCTGATGG TAATATTTAC ATTAAAGGCC AGATGAATGA TCCCTCTTTC
GGAGGGAGGC TCTTTCTGTT AGGTGGTGGT ATTAACCTCG GCCTTCCTGA AAAGTTCTCA
CTTATGAAAG GATATCTCAA TTTCAGGGGG CAGGAGATTT ACCTGGAAAA TATTACCGGC
AGGTATGGCA GGGGTAGTTT TAGAATAGAA GGTTATGTAT ACCCCTTTGA TCAGGATAAA
ACCTGGGATA TTTTCCTTCA GGGGAAGAAT CTACCCTTCA GTCATGGATC CTTTGAGGGG
AAGTTTGACC CCAGGGTTAA AATGGTTGGA CCCTTGAACA GGCCATTAAT TGAGGGGGAA
TTAATAACCC ATCATTTTAC CATTGGAATA CCCTTTTCCT GGCCAACCGG GAGTGGAGAA
GGGGTCAAAT TTATTCCAGA CCTGGATTTA ACCCTTTACC CGGGTGAGGA AGTATACCTG
AAAAATGATA ATATAGATGT CCTTATTCAG GAAGGAAGCC TTGGCCTCAG TTTTATTGAT
AATGAATTAC AGATGAAAGG CACGCTGACA AGCAGACAGG GGAGTTTTGA TATTTACAAT
AATAAGTTTA TTCTGGAGTA CGCTGAGGCC AATTTCAGGG AATACCTGGG GTATATCCCT
GAACTCCATG TCCGTTCCTA TACCCAGGTG GGTAATGTTA AAATTATGGC CCAGGTGGAT
GGCGCGGCCG ATCAGCTGAT GATTACCTTT CATTCCAGGC CCGAACTAAC AGAGGAACAG
ATATTGCAGC TTTTAACCAG TAAAGGTGGA GTAAAGGAAA TTATTGAAGG TGATGTTAAC
CAGGCTGTAA AGATGGAAGT GATGAGGATA TTTAATAGTT TTCTCCAGAT AGATATTGTT
GAGGATATAG AAAGTACTTT AAAGGATATC TTCAGGCTGG ACCGGGTTGA AATCGATACT
TACAATCTGG GCTGGAATCA GGAAGTTAAT ATCTATCTCG GGAAATATTT AAGTGATAGA
TTCTATCTAC AGTATACCAC TACTTTAAAA CCAGATAGCC GGGAAAGTGA AGTAGCTTTT
CAGTATTTCT TAAGGGAAAA TACAGTTTTT GAGGGAAGCT GGCATGGTGA AGATGATTAC
AGGCTGAGCA TTGAAACCAA TCTTAAATTT TAA
|
|---|
| Protein sequence | MKGKFSLKTK KRYLFILLIS VFILSVIIIQ GNRILTIARH ELIFYIENTF PQVNRLEVNN
ISIWPLNQLT LEGVMIETKD GSLSIKAPRV RVYYNLMGIL FNRDNWIGNI KLVSLKDPVL
RFSNFEAPSD SIDQTGDLKG FTIPFFPVEI KNGTVVAINK DQKIELGNTY LVLKEAGKSG
TILLKSDVSL EGIQYNNYKV EQVRINNLEA GIKYSQDNWE VNLRTGQFEL KSLEGIFREL
NLPVAVQTID SKGKLTLNLE GNTSQITDYK GKLELNQGQV GLESEYLTEN RLSSIQGIIL
LDSGQKQVVV EKLKFDLAGN PYTFKGELNH KEKIPRIYGH LVSEGVNLSR TGFNIPAINM
SGQAHLDITV LGRMTSPEVL TDIYVTEGEF QNYEIGELAA ELRYKDNIIY IDSLEGNFQD
NNSISVRGVY DLATSLYSFN LKGTDIRIAF IKQNFPQLNL PLSQGQLNSR LIISGQGNTL
TGSDITGYIE VINPQYRDIL MDRVFAELWY NGGNLILNEG KLEAQYGDIF FQGKVNIATS
RVELEYSGSK INSKVIQNLL DVKVLEDLAG FVNINGSIKN NLENPFITMD LSSNRVCLYN
KVFQNFNTSM EYRKGSLYIN RLKTVLENAE INGQGVINFA ASEPVIKTSV SIKKLGYDFF
QGISGHKLPV TGNLNAELKI RGPLANPELT GYVSSNNPVI NYNNRDVKIN TAKFKLKLLK
NNTFYIEDGV VVKDDSRVKV AGTINPVTRQ LNLKYIIDNL NLDDVYPDLE VDGSFNLTGN
IKGLFEAPDI SGEIWPGSLV YKGKEIKNIE GNYHYSNGKL TLEGSSFKVG RSKYNLSGMV
EYPFLDVTLE TREGRLSDLT PFLTSKVSIP EDYYLRGRIR LTGQFRKLRS AVDLEVFSSD
VKGDKLKISG SIGDKFNITL DGDRVNLGKI ISFLGSNVNI DGQVDFNGNL TGDINDYLLA
LNINIDEAMV NEFKINNING EVKLTPERVY LNQTALLPED SSIDVDGFIP FNKNEKIDLY
LGVNGVYLPI ISSAIPDLPD LEGYADGNIY IKGQMNDPSF GGRLFLLGGG INLGLPEKFS
LMKGYLNFRG QEIYLENITG RYGRGSFRIE GYVYPFDQDK TWDIFLQGKN LPFSHGSFEG
KFDPRVKMVG PLNRPLIEGE LITHHFTIGI PFSWPTGSGE GVKFIPDLDL TLYPGEEVYL
KNDNIDVLIQ EGSLGLSFID NELQMKGTLT SRQGSFDIYN NKFILEYAEA NFREYLGYIP
ELHVRSYTQV GNVKIMAQVD GAADQLMITF HSRPELTEEQ ILQLLTSKGG VKEIIEGDVN
QAVKMEVMRI FNSFLQIDIV EDIESTLKDI FRLDRVEIDT YNLGWNQEVN IYLGKYLSDR
FYLQYTTTLK PDSRESEVAF QYFLRENTVF EGSWHGEDDY RLSIETNLKF
|
|---|
| |