Gene Hore_17560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17560 
Symbol 
ID7313678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1877355 
End bp1877786 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content39% 
IMG OID643612203 
Product3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase;3-hydroxyacyl-(acyl-carrier-protein) dehydratase 
Protein accessionYP_002509500 
Protein GI220932592 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000132449 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTATA TCCAGGATAT TAAAAATATA CTACCACACC GGTTCCCTTT CTTGCTGGTT 
GATAGAATTA CAGAGTTAGA GCCTGGTAAA AAAGTAGTTG GTTTTAAAAA TGTAACAGTA 
AATGAAGAAT TTTTTCAGGG ACATTATCCC GGACATCCAA TTATGCCTGG TGTCCTTATA 
ATTGAAGCGA TGGCCCAGGT GGGTGGCTTT TTAATGATGT ATAGTGTTGA TGATGATGAG 
GAAAAGATTC CTCTCTTTGC CGGGATAGAT AAAGCCAGAT TTCGGCGCAA CGTTGTACCG 
GGTGACAGAT TAAGGATTGA GGCTGAGGTT ATTAAGTTAA GAGGTAGAAT CGGCAAGATT 
GCAGCTAAAG GTTTTGTTGA GGATGAATTA GCAGCTGAGG CTGAATTAAT GTTTGCTATA 
AATGATAAGT AG
 
Protein sequence
MMYIQDIKNI LPHRFPFLLV DRITELEPGK KVVGFKNVTV NEEFFQGHYP GHPIMPGVLI 
IEAMAQVGGF LMMYSVDDDE EKIPLFAGID KARFRRNVVP GDRLRIEAEV IKLRGRIGKI 
AAKGFVEDEL AAEAELMFAI NDK