Gene Hore_17350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17350 
Symbol 
ID7313657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1853728 
End bp1854591 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content39% 
IMG OID643612182 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002509479 
Protein GI220932571 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGTAT TGGTGACCGG AGACAAGAAA TTCTGCAGGA CTTTTGTTAA GAAACTGGGT 
ACCAGATACC GGGTTATTTT TTTAGGAAGA GATGACCTTG ATATTACAAA TACCCTGGAA
GTGGAAAAAA AGATACTTGA TGTCTATCCT GATATAGTTA TTCACTGTCT GGCCCTGGAT
GATATTGAGG CCTGTGAACG TGATAAAGCA ATGGCCTTTC AGATTAATTC TTACGGTGCC
CAGAATGTTG CCATTGCTTC CAGTATGTGT GAGGCTAAAC TTGTTTACAT AAGCACCAGT
CATGTTTTCA GTGGCAGGCT TAATAGACCT TACCGGGAGT CAGATGAGCT TCAACCGGTA
AATGTTTACG GTTTATCTAA ACTACTTGCT GAAAATTTTA TTAAAGAAAT AAACAGGAAA
TTTTTTATTG TAAGGACTGG CTGGCTTTAC GGGCCGGGCC GGGATTCTCT TATAGGCAAA
TTGATTGAAA CTTCAAAGCA GGAAAAAACA GTTGAGCTTC CCGGTGACAG ATATGATACT
CCTACCTTTA TTGGAGATCT GGCCCATATT ATTGGACGGT TAATGACTAC TGATTTTTAT
GGTACCTATC ATATAACAAA TAGTGGCTAC TGTAGCCTGT ATAGCTGGGG CCTGGAAGTA
GTCAGGGCAT TGAAATTAAA TGTAAATATT AAAGAGGTAA CCCTGGAACA CCAGTCTGGT
CTGGTTAGAA TACCGGAATA TACAGTTCTT GATAATAACC TGGTAGCTAA TAAACTTGGT
ATCAGGCCCA GGGGCTGGAG GAAGGCCCTG AATTCTTACC TGGTTGATTA TTTAATATAT
AATTCTATAA ACAGTGTATC TTAA
 
Protein sequence
MKVLVTGDKK FCRTFVKKLG TRYRVIFLGR DDLDITNTLE VEKKILDVYP DIVIHCLALD 
DIEACERDKA MAFQINSYGA QNVAIASSMC EAKLVYISTS HVFSGRLNRP YRESDELQPV
NVYGLSKLLA ENFIKEINRK FFIVRTGWLY GPGRDSLIGK LIETSKQEKT VELPGDRYDT
PTFIGDLAHI IGRLMTTDFY GTYHITNSGY CSLYSWGLEV VRALKLNVNI KEVTLEHQSG
LVRIPEYTVL DNNLVANKLG IRPRGWRKAL NSYLVDYLIY NSINSVS