Gene Hore_17300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17300 
Symbol 
ID7313652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1847133 
End bp1848446 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content46% 
IMG OID643612177 
Productglutamate synthase (NADPH) large subunit 
Protein accessionYP_002509474 
Protein GI220932566 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTA CAAAATACCT TATTGAAAAG TATATGGGTG GTTTTATAGA CAGGTTAGTT 
GAAGACAAAT ATACCGAAAA TCTATGGGAA ATGTACGGGA CCACTGAAAA GATATTCCCA
CGGACCCTGG TGGAAACTGC CATGAGGGCC AAACAGGGAA CTCCCCTAGA AAGGCCCTTC
GGTACTCCCC AGCATTTTTC ACCATGGTAT AAGCTTTTAT TTAACCCGGT ACACCTCTTT
AAAATGCCCA CTGTTGATAG TGTTCAGGTG GATACATCGG TAACCCTGGG TCCTGGTGCC
AGCAAACCAC TAACCCTTGA TATCCCTATT ATGATAAGTG GAATGTCATA TGGTGGGGCC
CTGAGTAAAA AGGCCAAAAT TGCCCTGGCC CGGGGTGCTT CTCTTATGGG GACAGCTACC
AATTCCGGGG AGGCCCCCCT GCTGGAAGAG GAAAGGGAAG CCGCCTGTTA TTTTATTGGT
CAGTATAACC GGGGAGGATG GATGACCGGG GATATGCTGC AAAAGCTGGA TATGGTAGAA
ATACAGGTTG GACAGGGGGC CCAGGCCGGT GCTCCCATGA AAACAAAGAG TAATAAAATA
GGTCCGGAAT TCAGGAAATC CTTTCATCTT AATAAAGGCC AGAATGCGCT GATAGATGGG
AGACTCCCCG GTATTAATAG TGCTGAGGAC TTTATAGAAC TTGTGAAAAG ACTTAAAGAA
AAGGTTGATG TTCCTGTCGG GCTTAAGTTT GCCGCGACCC ATCACCTGGA AAAAGAGCTG
GCCATTGCCG TAGAAGCCGG TGTTGACTTT ATAACAGTAG ATGGGGCTGA AGCCGGGACC
CATGGAGGGC CGACTATTCT TGAGGACCAC TTTGGATTAC CGACTCTTCA TGCCCTGTGC
CGGACGGTAA CTTTCCTGGA AAAAGAAGGT TTAAAGGATA AAATTTCAGT CATTGCCAGT
GGTGGGCTTT TAACTCCGGG TCATTATTTA AAGGCACTGG CCCTGGGAGC GGATGCGGTT
TATATAGGAA CAATTGCGGT TATGGCCATG GTTAGCAGTC AGATAAAAAA GACCGTTCCC
TGGGAGCCAC CGACCGAATT GGTTTTATAT TCCGGGAAGC AGAAAAACGA ACTTGATGTA
GATAAGGCTT CCCTCAATCT GGCCTATTAT CTTAAATCCT GTGTTAAAGA GATGGAACTG
GCCATAAAAG CCCTTGGCAA GGAGAAAATA TCTGAAGTGG ATAAAAAAGA TCTATGTGCA
TTAACAGAAG AAGTTGCCAA AATTACTGGG GTTGAGCTTG TTTATCTTCC ATAA
 
Protein sequence
MQITKYLIEK YMGGFIDRLV EDKYTENLWE MYGTTEKIFP RTLVETAMRA KQGTPLERPF 
GTPQHFSPWY KLLFNPVHLF KMPTVDSVQV DTSVTLGPGA SKPLTLDIPI MISGMSYGGA
LSKKAKIALA RGASLMGTAT NSGEAPLLEE EREAACYFIG QYNRGGWMTG DMLQKLDMVE
IQVGQGAQAG APMKTKSNKI GPEFRKSFHL NKGQNALIDG RLPGINSAED FIELVKRLKE
KVDVPVGLKF AATHHLEKEL AIAVEAGVDF ITVDGAEAGT HGGPTILEDH FGLPTLHALC
RTVTFLEKEG LKDKISVIAS GGLLTPGHYL KALALGADAV YIGTIAVMAM VSSQIKKTVP
WEPPTELVLY SGKQKNELDV DKASLNLAYY LKSCVKEMEL AIKALGKEKI SEVDKKDLCA
LTEEVAKITG VELVYLP