| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_17250 |
|---|
| Symbol | |
|---|
| ID | 7313647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1841555 |
|---|
| End bp | 1842514 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643612172 |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_002509469 |
|---|
| Protein GI | 220932561 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGTAT TATTGACTTT TGATTTAAAA GATAAGTATA TAGAAAAGGT TAAAAGGGAA
GTACCGGGTG TTGATATCAT TAGATGCCCT GATATTGAAG ATTACGGGAA TAAAGTTCAG
GGTTGTGAAG TGATGCTTAC TTTCTCTGAT ATAAACCTGG AGGTTATAAA AAATAAAGCC
ACAGACCTGA GGTGGATACA GACTTGGGTA GCCGGGGTAG AGAGTCTTGT GACTCCTCAA
AAAGTAAAGT GGTTCAGGGA TAATAATATA ATTTTAACCA CAATGAGCGG TATTCATGGT
GATGTTATTG CTGAACATGT TACCGGGATG ATAATTTCGT TTAGCCGTAA GTTTAAGGAT
TTTTACCGGC TACAGAAGCA GAAAAAATGG GAGAGGTTAA CTGTAGACCG TCTAAAAGGG
AAAACCCTTC TGGTAGTTGG TCTGGGTAGT ATTGGAAGGG AGATAGCGGC CCGGGGTAAA
GCCTTCAAAA TGAACGTAAC CGGAATAAAA CGGGATACCA CCCGACCTGT TAATAATGTT
GACAGTCTAT ATACCCCTGA TGAATTATTA AAAGCCCTGT CAGAGGCAGA TTATGTAGTC
TTGAGCATGC CCCTGACACA AGAAACAGAG AATATGTTTG GATATCGAGA GTTTAAAGAG
ATGAAGACTG ATTCATATCT TATAAATATT GCCAGAGGGG GTGTTGTCAG GGAAGATGAC
CTGATCAGGG CGTTGGATGA AGGCCTTATT GCCGGGGCAG GGCTCGATGT ATTTACAGAA
GAACCTCTAC CCCCGGAATC TCCCCTGTAC GAAATGGATA ACGTTATTAT AACCCCCCAT
GTGGCCGGTG TTTATCCTGA ATATAATGAA GAGGCGATAG AAATTTTTAT AAAAAATCTA
AAGAGGTATC AGAAAGGTGA AGATTTAATT AACCGGGTCA ATTATAGCCG TGGGTATTGA
|
|---|
| Protein sequence | MKVLLTFDLK DKYIEKVKRE VPGVDIIRCP DIEDYGNKVQ GCEVMLTFSD INLEVIKNKA
TDLRWIQTWV AGVESLVTPQ KVKWFRDNNI ILTTMSGIHG DVIAEHVTGM IISFSRKFKD
FYRLQKQKKW ERLTVDRLKG KTLLVVGLGS IGREIAARGK AFKMNVTGIK RDTTRPVNNV
DSLYTPDELL KALSEADYVV LSMPLTQETE NMFGYREFKE MKTDSYLINI ARGGVVREDD
LIRALDEGLI AGAGLDVFTE EPLPPESPLY EMDNVIITPH VAGVYPEYNE EAIEIFIKNL
KRYQKGEDLI NRVNYSRGY
|
|---|
| |