Gene Hore_17200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17200 
Symbol 
ID7313642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1836032 
End bp1837114 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content45% 
IMG OID643612167 
Productglycosyl transferase family 9 
Protein accessionYP_002509464 
Protein GI220932556 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II
[TIGR02201] lipopolysaccharide heptosyltransferase III, putative 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATCC TTGTTTTAAT TCTATCAGCT CTGGGTGATG CCCTGTTTAC GACACCGGCA 
CTCAGGGCTT TAAGGAACGG TTATCCGGAT GCCAGAATAG ATGCCCTGGT CTGGGAAGAT
AATAAAACTA TTCTGGAAGG CAACCCCAAC CTGGATAGGC TGATAGTCAG TAAAGGGAAA
GGAAAGCTTA TCTCCGATGT TCAGAGCTTA AGGGAGGAGG TTTACGACCT GGCCATTGGA
TTATCCAATG CAGGCAGTTA TATAGCATAT CTGGTTAATG CCAGAAAAAG GCTGGGTTTC
AAGGGTTCTG AAATAGGGTG GATGTATGAC TTCAATGTAC CCGATGATAG AAACATCCAT
GCCGTCGATT ACTGCCTCGA GATTGTAAAG GTGGCAGGGG GTAAACCCGA TATAAATCCT
CACCTCGAGG TTGCAATAAA TGACGAACAA CGTCGGTCTG TGGCTGAATT TATGAAAAAA
AAGGGTATTA TAACTTCTTT ACCCCTGGTG GCTATTCACC CTGGAGGTAA ATATTTCTCC
TTAAAGCGCT GGCCAGTGGA TAAATTTTCT GAGTTGGTTA AGGTCCTGGA TAAAATGATA
CCCCTTCAGG TTGTTCTGGT CGGAGGGCCT GATGATAGAG AACTTGCCAC CCGGATTATT
GACCCTGATT ATAATTATAA CCGTAAACCT GTAATTGTTG CCGGAGAGTT ATCGGTTAAG
GAAACTACGG CCCTGCTGGA ACAGGTTGAT TTGTTTATTG GAAATGATTC TGCTCCCCAG
CATATGGCCT CAGCTGTGGG GGTACCGGTG GTTTCTCTGT TTGGCCCTAC CAATCCGGCA
AACTTTTATC CATATGGGAC TGAACACATT ATAATTCGCT CTGACCTCTC CTGTAGCCCC
TGTTTTTCCT GGTTGGGGGA TTTAAAACAA TACCTGCCTG AATATTTACC AGAATGGGTA
ACTAAATGTA AGGGTAAGTG TATGGAGGAA ATAGAGGTAG CCGATGTTGT CAGAGCGGCC
CGGCAGTTAT TAGTTAACAA AAGGTCAGGT TATAAACTTA TTTCAACTGG GGGTAGTGTC
TAA
 
Protein sequence
MKILVLILSA LGDALFTTPA LRALRNGYPD ARIDALVWED NKTILEGNPN LDRLIVSKGK 
GKLISDVQSL REEVYDLAIG LSNAGSYIAY LVNARKRLGF KGSEIGWMYD FNVPDDRNIH
AVDYCLEIVK VAGGKPDINP HLEVAINDEQ RRSVAEFMKK KGIITSLPLV AIHPGGKYFS
LKRWPVDKFS ELVKVLDKMI PLQVVLVGGP DDRELATRII DPDYNYNRKP VIVAGELSVK
ETTALLEQVD LFIGNDSAPQ HMASAVGVPV VSLFGPTNPA NFYPYGTEHI IIRSDLSCSP
CFSWLGDLKQ YLPEYLPEWV TKCKGKCMEE IEVADVVRAA RQLLVNKRSG YKLISTGGSV