Gene Hore_17130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17130 
Symbol 
ID7313231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1829645 
End bp1830550 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content41% 
IMG OID643612160 
Productflagellar hook-associated protein 3 
Protein accessionYP_002509457 
Protein GI220932549 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTA CCAATAATAT AATGGTTACC AATTTAAAGA ACTATTTACA GCGGGGTATG 
AAAGCCCTGG ATAAATATAA TAAGAAACTG GCTACCGGGA AGGAGTTTAC CTTACCGGAG 
GAAGACCCGA TTGCAACCCA ACGGAGCATG ATTCTTCACT CTGCTCTCAA AGCCAATAAA 
CAGTATCAGC GAAATGTAGA CCATGCCCAG GACTGGCTTT TGAATACAGA ATCAGCCTTA 
CATGATGTTA ATGATGTCTT GCAGAGGGCT TACCAACTGG CTGAACATGG AGCCAATGAT 
ACTGTATCTG ATGAAGAGCG AGAAGCTATT GCTCAGGAAA TAGAAGAATT AAACCAGCAC 
CTGGTGCAGC TGGCCAATAC AAAGGTTGCC GGTAAATATA TATTCAGTGG CAGTGCTACG 
GATACAAAAG CCTATGTGGC TAATTATAAT AGTGGGACAG ATACCTATAC ATTTACTCAT 
TATCAGGGCG ATAATGTTAG TCTAACTGCG GAGATAAGTC CCGGTGTCCC GGTGGATTAT 
AATATTAGTG GAGAGGATGT TTTTGGTCCT AATGGTGAGC TCTTTAATAT TCTGGAGAAT 
TTGCGCCAGA ATCTAAAAAA CGATAATAGG GATGCTATTG AAACCCGGAT TGGGGAATTA 
GAAGCAGAGA TGGATAATAT AATGAAACAC TTCTCTATAA TCGGAGCCAA GACCAATCGT 
CTGGACTTAT CGAAAAACAG ATTATCCAGT GAGGAACTTA ATTTAAATCA ATTAATTTCC 
CGTAACGAAG ATGCAGATAT GGCAGAAACT ATAATGAACC TCAAGATGCA GGAAAATGTT 
TTCAGGGCAA CCCTGGCTTC TGGAGCCAGA ATCATTCAAC CGAGCCTGGT TGATTTTATA 
AGATAA
 
Protein sequence
MRITNNIMVT NLKNYLQRGM KALDKYNKKL ATGKEFTLPE EDPIATQRSM ILHSALKANK 
QYQRNVDHAQ DWLLNTESAL HDVNDVLQRA YQLAEHGAND TVSDEEREAI AQEIEELNQH 
LVQLANTKVA GKYIFSGSAT DTKAYVANYN SGTDTYTFTH YQGDNVSLTA EISPGVPVDY 
NISGEDVFGP NGELFNILEN LRQNLKNDNR DAIETRIGEL EAEMDNIMKH FSIIGAKTNR 
LDLSKNRLSS EELNLNQLIS RNEDADMAET IMNLKMQENV FRATLASGAR IIQPSLVDFI 
R