Gene Hore_17080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_17080 
Symbol 
ID7313226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1826357 
End bp1827205 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content41% 
IMG OID643612155 
Productflagellin domain protein 
Protein accessionYP_002509452 
Protein GI220932544 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTA ATCACAACAT TAGTGCTATG AATGCTTATC GTAATCTGCA GTTTAATGAT 
GTGAAGATGG GTAAAACCAT GGAAAAACTT TCTTCTGGTT ACCGCATCAA TAGAGCTGCA
GATGATGCTG CAGGTCTGGC TATCTCAGAA AAGATGCGTG CTCAAATTAC AGGTTTAAAC
CAAGCTATCC GTAATGCTCA GGACGGTATC TCCCTGGTAC AGAGTGCTGA GGGTGCTTTA
ACCGAAGTAC ACAGCATGTT AAACCGTATG CGTGAACTGG CTGTACAGGC TGCTAATGAT
ACCAATACAG ATGAAGACCG TGCTCACCTC AATGCTGAGG TTACTGAATT AATTAATGAA
ATTAATCGTA TAGGTAGTCA AACAGAATTT AACGAAATGC AGGTTCTTAA TGGCTCATTT
GATGCTTCTG CAGGAGGTAC TGCTATATTC CATATTGGTC CTAATGCTAA TCAGACCATA
AATGTTAACG TTGCAAGTAT GAATGCTAAC GCTATAGGTT CTACTGCTGA TGTTGCCAAT
CTAGCTGCTA TATCTATTTC TACTCAATCT AATGCAGAAA TTGCTCTTGA TTCTATAGAT
ACTGCCATTA ACCAAATTTC TCAGCAGAGA GCTAAACTTG GTGCTGTTCA GAACAGACTC
GAGCATACAG TAAATAACTT AAATGTTACC AAAGAAAACC TGCAGGCTGC TGAATCAAGA
ATTCGTGATG CTGATATGGC TGCTGAAATG ATGAAGTTCA CCAAGCAGCA GATTCTGGTT
CAGGCCGGTA CTGCTATGCT GGCTCAGGCT AATGCTAAGC CTCAGGCTGT TCTGCAGCTG
CTTGGTTAA
 
Protein sequence
MIINHNISAM NAYRNLQFND VKMGKTMEKL SSGYRINRAA DDAAGLAISE KMRAQITGLN 
QAIRNAQDGI SLVQSAEGAL TEVHSMLNRM RELAVQAAND TNTDEDRAHL NAEVTELINE
INRIGSQTEF NEMQVLNGSF DASAGGTAIF HIGPNANQTI NVNVASMNAN AIGSTADVAN
LAAISISTQS NAEIALDSID TAINQISQQR AKLGAVQNRL EHTVNNLNVT KENLQAAESR
IRDADMAAEM MKFTKQQILV QAGTAMLAQA NAKPQAVLQL LG