| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16970 |
|---|
| Symbol | |
|---|
| ID | 7313215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1815644 |
|---|
| End bp | 1816819 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643612144 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_002509441 |
|---|
| Protein GI | 220932533 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGACA AACTAAATAT TCCGTTATCA GTACCTAATC TATCTTTAGA TATACTTGAT
AACTTAAAAG AGTGTATTGA AACGGGGTGG GTTTCAACGG GGGGAAGATT TATAAAAGAA
TTTGAGGATA AAGTGGCTAA ATATGTAAGA GTTGAAGAAG CCGTTGGAGT GCAGAGTGGC
ACGGGAGCTC TTCATCTCGG TTATCAATTG TTAGGGGTTA AACCCGGGGA CGAAGTAATC
GTTCCTACCG TGACCTTCAT TGCTACAGTT AACCCCATAA CTTATCTGGG AGCCCATCCT
GTATTTATGG ACTGTGACGA TACTTTAAAT ATGGACCTGG ATAAACTTGA AGAATTTCTT
GATAGTCACT GTGAAATAAC TGATAAGGGT TTATTAAATA AAAAAAGCAA GAGAATTATA
AAAGTGTTAA CTGTCACTCA TATTTTTGGT AACCCCATTG ATATGGAACG GGTTATGAAA
ATAGCTGGTA GATACAGGTT AAAAGTATTG GAAGATGCCG CTGAATCTTT AGGTTCATTT
TATATCAGTG GTAAATATAA AGGGAAACAT ACGGGAACAA TCGGGGATTT AGGAGTGTTT
TCATTTAATG CTAACAAGAT ACTAACGACT GGTGGAGGGG GAATGATTGT TGCTAAGGAT
AAAAAATTAG TGAATAAAGC TCGCTTTTTA TCTACTCAGG CCAAAACAGA CCCCCTTTAT
TTTAAACATG ATGAGATAGG TTACAACTAT CGCCTTACCA ATATAGCTGC TGCTTTGGGG
ACAAGTCAAA TTGACAAAAT TGAGGATTTT GTTAAAATAA AAAAAGAAAA TTATCATCTA
TATAAAAAAG AGATTAACAA TATTGAAGGG TTAGAGCTTT TGCCCTTTAA CGAGGGAACG
AGGCCCAATT ATTGGTTTTA TTCCTTAATT GTCAATTCTG AAAAATATGG ACTTAATAGA
GATGAACTAT TACATAAACT TAATAGTGTT GGGATACAAA CAAGACCTCT CTGGGGGCTT
GTCAGTAAGC AAAAACCCTA TAAAAACTAC TTCGCCTATA AAATAGAAAA GGCTAGATAT
TATGTTAATA ATTTGATTAA CATACCCTGT AGTACTAATT TGAAAAAAGA GCAGGTCTTG
CAGGTTATAG ACAAATTAAA AGGCTTTAAG AAATAA
|
|---|
| Protein sequence | MEDKLNIPLS VPNLSLDILD NLKECIETGW VSTGGRFIKE FEDKVAKYVR VEEAVGVQSG
TGALHLGYQL LGVKPGDEVI VPTVTFIATV NPITYLGAHP VFMDCDDTLN MDLDKLEEFL
DSHCEITDKG LLNKKSKRII KVLTVTHIFG NPIDMERVMK IAGRYRLKVL EDAAESLGSF
YISGKYKGKH TGTIGDLGVF SFNANKILTT GGGGMIVAKD KKLVNKARFL STQAKTDPLY
FKHDEIGYNY RLTNIAAALG TSQIDKIEDF VKIKKENYHL YKKEINNIEG LELLPFNEGT
RPNYWFYSLI VNSEKYGLNR DELLHKLNSV GIQTRPLWGL VSKQKPYKNY FAYKIEKARY
YVNNLINIPC STNLKKEQVL QVIDKLKGFK K
|
|---|
| |