Gene Hore_16860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16860 
Symbol 
ID7313204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1806065 
End bp1807378 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content48% 
IMG OID643612134 
Productflagellar protein export ATPase FliI 
Protein accessionYP_002509431 
Protein GI220932523 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase
[TIGR03496] flagellar protein export ATPase FliI
[TIGR03497] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGGA TTGATTTTTC CCAGCTGACT TCAGTTGTAG ACAGGGCCCG GGTGACCAGA 
AACTATGGCC ATATAACCCG GGTAGTTGGT TTAATTATAG AGTCCAAAGG ACCAGAAGTC
AGTATTGGAG AAATATGTTT AATAAAAAAC GGTAAACGGT CTGTTAAGGC AGAAGTGGTT
GGATTTGATA AGGATAAGGT CTTATTAATG CCCATCGGGG AAATGAGGGG AATAAACCCC
GGGGCCAGGG TCGTGGCCAC CGGTGAAAAA TTGACAGTTA AGGTCGGGGA AGGCCTGCTG
GGACAGGTAT TAAACGGTCT GGGCCAGCCT ATCAGTAGTG GTTTAAAAAT GAGGCATGGT
TTTACTGAAG TCCCCGTCAT GGCCCAGCCC CCCGATCCCC TGTTGAGAAA AAGAATTACT
GAACCTTTAA GCCTTGGAAT CCGTAGCATT GACGGTCTTT TAACCTGTGG CCGGGGGCAG
CGTGTCGGTA TTTTTGCCGG TAGTGGTGTC GGTAAAAGTA CCCTGCTGGG AATGGCTGCC
CGTAACACCG AGGCAGACAT TAATGTTATT GGACTTGTTG GCGAACGTGG CCGTGAGGTC
CGCGACTTTA TTGAAAGGGA CCTCGGTCCT GAGGGTTTAA AAAAGTCAAT TGTGGTCGTT
GCCACCTCGG ATAAGCCAGC CCTGGTCAGG GTTAAGGCTG CCTATGTAGC CACTGCTATT
GCTGAGTTCT TCCGTGACCA GGGGAAAAAT GTCCTCTTAA TGATGGATTC GGTAACAAGG
GTGGCTATGG CCTTCCGTGA AGTGGGTCTA GCTGTTGGTG AACCTCCAGC TACCAGGGGT
TACCCCCCTT CGGTCTATGC TGAATTACCC AAACTCCTGG AAAGAGCGGG GACAAACCAG
CATGGCACCA TTACAGCCCT CTATACGGTA TTAGTCGAAG GTGATGACTT TAATGAACCC
GTTTCTGATA CGGTCCGGGG TATTCTGGAT GGCCATATTG TGTTATCCCG GGACCTGGCT
TCAAGGAATC ATTATCCGGC TGTAGATGTC CTGGAGAGTG TCAGCCGTTT GATGCCTGAT
ATTGTAGATG AAGAGCATTT GCAGGCGGCC GGTGAGGTTA AGAAAATGCT GGCTGATTAT
CGAGAATCAG AAGACCTGAT AAATATCGGG GCCTATAAAC CGGGTAGTAA TCCGGCCATT
GACAGGGCCC TTGAAAATAT AAATGATATT AATACCTTCC TGAGACAGGG TATTGGCCAA
AAGTCCAGTT TTGAAGAAAC GGTAACTATG TTAAAGCAAA TTGCTGGAAA GTAA
 
Protein sequence
MKGIDFSQLT SVVDRARVTR NYGHITRVVG LIIESKGPEV SIGEICLIKN GKRSVKAEVV 
GFDKDKVLLM PIGEMRGINP GARVVATGEK LTVKVGEGLL GQVLNGLGQP ISSGLKMRHG
FTEVPVMAQP PDPLLRKRIT EPLSLGIRSI DGLLTCGRGQ RVGIFAGSGV GKSTLLGMAA
RNTEADINVI GLVGERGREV RDFIERDLGP EGLKKSIVVV ATSDKPALVR VKAAYVATAI
AEFFRDQGKN VLLMMDSVTR VAMAFREVGL AVGEPPATRG YPPSVYAELP KLLERAGTNQ
HGTITALYTV LVEGDDFNEP VSDTVRGILD GHIVLSRDLA SRNHYPAVDV LESVSRLMPD
IVDEEHLQAA GEVKKMLADY RESEDLINIG AYKPGSNPAI DRALENINDI NTFLRQGIGQ
KSSFEETVTM LKQIAGK