| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16630 |
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| Symbol | |
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| ID | 7313181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1787136 |
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| End bp | 1787900 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643612111 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_002509408 |
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| Protein GI | 220932500 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGTTT CTCAGGAAAA AGTTGAGTAT CTTGACTTGT GGGAGGCCTA TAAGGGTAAA
GGTAGCCAGG AGGCCAGAAA GGAATTAATA CTAAACTATT TACCCCTCGT TAAATACCAG
GTAGAGAGGG TCAAAATGAT CATACCTGAT TTTATAGAGG AAGATGATCT GGAAAGCTAC
GGGATAATTG GCTTAATAGA TGCTATTGAA AAATATGACT ACAGACTGGG TATCAAGTTT
AACACATATG CTTCCCGACG AATCAGAGGA TCTATTATTG ATCACCTCAG GAAACTTGAC
TGGTTACCCC ATTCTCTCCG CCGGGAAGGG AAAGAACTCC AGAAGGTAGC TGATAAACTG
GCTAAAGAAC TGGGACGAAA ACCGACTGTA GCTGAACTGG CAAATAAGAC TAATATTTCC
CGGGAAAAGG TCACAAAAAT CTATTCAAAG TTAAATTCAG CTAAATGGGT GTCCCTGTAT
GAAGACTGGG GCGAGTCGAC AGTATTCAAT TTTATTAAAG GTGATTGCCT TCCCCCTGAC
AGGATACTGG ATAAAAAGGA GAGGATAAAA CTCCTGGCCA GGGCAATAGA CCGGTTAAGT
GAATCGGAGC GGACTGTTAT TTCTCTATAT TATTATGAGG AATTAACCCA GAAAGAAATT
GCAGAAGTTA TGGGGTTGTC TCCAGCACGA ATTTCCCAGA TCCATAAAAG GGCGGTTTAC
AGGTTAAGGG GTTATTTAGC CAGGAGAAAA TATGATTTAT TATGA
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| Protein sequence | MAVSQEKVEY LDLWEAYKGK GSQEARKELI LNYLPLVKYQ VERVKMIIPD FIEEDDLESY
GIIGLIDAIE KYDYRLGIKF NTYASRRIRG SIIDHLRKLD WLPHSLRREG KELQKVADKL
AKELGRKPTV AELANKTNIS REKVTKIYSK LNSAKWVSLY EDWGESTVFN FIKGDCLPPD
RILDKKERIK LLARAIDRLS ESERTVISLY YYEELTQKEI AEVMGLSPAR ISQIHKRAVY
RLRGYLARRK YDLL
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