Gene Hore_16560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16560 
Symbol 
ID7313174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1780849 
End bp1781859 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content43% 
IMG OID643612104 
ProductFlagellar basal body P-ring biosynthesis protein 
Protein accessionYP_002509401 
Protein GI220932493 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0109519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAGC GTACCGGACA GAAGGGTGTT AAAATATCCA GATTAATTTT GCTGCTGCTG 
GTAACAGTTT TATTATTAGT GACTTTATCT GCTGATATCC TGGCCGGGGA GGAGATAATT 
TATAAGATAA GTAGGACTGA GGTCATTATT TCCTCTCCCC AAATTTACCT TGGTGATATA 
GGTAGCTTTA CGGGTGTCAG TGGACAAAAA CTAACTGAAT TAAATAAAAT TAGTCTGGGA 
CGGGCCCCCT TACCCGGCTA TTTCCGGGAA ATAACCCGGG AGTTAATATC CCTTATATTA 
AAGGAAAAGG GTTTTATCGA CATCAAGCTC ATGGTCCCTG AAGTTGTTAT TGTAAAAACC 
TCCAGTAGAG AAATAGAGGG GGAAAAGCTA CTGGAGGAGG GGCGTCAATT TATATTAAAT 
AAACTGGCCC CCCGGGCAGA AGGGGTGGCT ATAACCCCTA CTATTACCCC CCGGAATGTA 
GTAATACCGG ATGGGGAATA TAGTTTAAAA TTTCTCGAGG AGGATCCGGA TAAATTAATC 
GGAAATATCT CCCTTCCCAT TGAAATTATA GTTAATGGTA AGGTGTGGCG GCGTATCTAT 
TTAGGTTATA AAGTTGAACT CAGGATGAAA GTCCTTGTAG CGACCCGGAA TATAAAAAGA 
GGGAGCAATA TCTGTAAAGA GGATTTGGCC CTGACAACTG AGAAGATAAC TGGAGTCAGG 
GGAGAGATTA TAAATGATTT TAATGACCCC CGGCTGTCAT ATTCCATTGT TAAGATCCCT 
TTACAGAAGG GAGAGATACT GACTACTGAT CACCTGGAGC AACCAGTGGT CATACACTGG 
GGGGATATAG TAGAAGCAGA GGTTATTGTC AGGAATGTTA AGGTCTCTAC CAGTGTTAAG 
GCCCTGGGTA GTGGCCGGGT GGGCGATTAT GTAAAGGTTA TAAACCCTGA AACCGGTTAT 
GAATTTAAAG CCAGGGTTAT TAATTCGAGA CTGGTCAGGG TCGTCCGCTA A
 
Protein sequence
MVKRTGQKGV KISRLILLLL VTVLLLVTLS ADILAGEEII YKISRTEVII SSPQIYLGDI 
GSFTGVSGQK LTELNKISLG RAPLPGYFRE ITRELISLIL KEKGFIDIKL MVPEVVIVKT 
SSREIEGEKL LEEGRQFILN KLAPRAEGVA ITPTITPRNV VIPDGEYSLK FLEEDPDKLI 
GNISLPIEII VNGKVWRRIY LGYKVELRMK VLVATRNIKR GSNICKEDLA LTTEKITGVR 
GEIINDFNDP RLSYSIVKIP LQKGEILTTD HLEQPVVIHW GDIVEAEVIV RNVKVSTSVK 
ALGSGRVGDY VKVINPETGY EFKARVINSR LVRVVR