| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16520 |
|---|
| Symbol | |
|---|
| ID | 7313170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1776157 |
|---|
| End bp | 1778658 |
|---|
| Gene Length | 2502 bp |
|---|
| Protein Length | 833 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643612100 |
|---|
| Product | SpoIID/LytB domain protein |
|---|
| Protein accession | YP_002509397 |
|---|
| Protein GI | 220932489 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2385] Sporulation protein and related proteins
[COG4632] Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase |
|---|
| TIGRFAM ID | [TIGR02669] SpoIID/LytB domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000390469 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAA CAGCTATACT ACATGAGACT ATCTGGCCCG GACACTTTCT TTTAATTTTT
TTAGTAATCC TGGCCGGCCT TTTTTTTATA AATATTGATG TATTTGCCTT ATCCCAGGAG
ATGACCCAGT TTATCGAAGA TGGTAAAACT ATTAATGTAA AAATAGAAGA AAATATTACC
AGATTAACCC TGACCCCCCA ATCTGATATT GAGGTATATG ATTATACAAC AAAAAAGAAC
TACAGGCTTA AAAGGGGTGA GGTCTACACT CTCAGAGTTA CGGGTGTGGG TCCGACCCGT
AGCCTGGGAT ATAGAGTCCA GGTGTTTGCC AGTTTTGATA AAAATAAGTC TTTGAATGTA
AAAAATCAAT TGCAGGAAGC GGGATATCAA AAAGTCTTTA TTGTCCGGGA TGGGAAATGG
TATAAAGTCC AGATAGGTGA TTATAGTTCA AGGGAGAAGG CAGGAGAAGT TGCCAGTAAA
CTGAATGGAG AGGGCTGGGA AACCTGGGTG GTTTCCGGTC CTTTTACACC ACGGAGTGGT
AACTGGATAG AGATCTTTTA TAAAAAAGAG GTTATTTTCA GGGGTAAGGT CCTGGAACTA
GGGGGAGAGG TAAAGATTGA GAATTATGGA CTTTTTCCGG GAAAGACAGA AATTGTTATG
TCCGGACATT CTCTTACAGT CTATAACCTG GTTCCGTTAA GGGACCTCCT TTATGGCCTA
GTGGCCGGTG AATTGTCTAT TAAAGACAGA AAACATCTGG AAGCGGCTAA AGCCCAGGCT
GTGGCTTCCC GGAGTTTTAT CCTCCATGAG CTTTTTTATG GTAATGAAGA GGTTTTTACA
TTTAATAATT ACCGGGGGCT TGAGGGGGTT AATTATCTGG CAAAGATGGC CGTAAACCTC
ACTTCAGGAG AAGTCCTGGT CTATGATGGG AGGATAATTA AAGCTGTTTA CCATGAAGAT
AGTGGTGGTT TGACCGCTGA CAGTAAAGAT GTCCTGGCAG AAGAGATTCC CTATTTAAAA
CCGGTTACTG ACGGGTTAAA AAGCAAAATC TGGAATAAGG TTTTTTCCGG GCATGAACTC
GAAAAAAGAC TTACCGGGTT GTTAAAGGAT AAACTGGATC TGGAGATATT ATGCCCGGGG
ATAAGGGATA TAAAGACTGT AACCGATGAA AATGGCCGGG TTATCAGGGT GGATTTTGTT
ACAGATTTTG GAATATATTC TGTTTATAAA GATAATATCA GATCGTTTTT TTCTACTACT
GAGGGCCTGT TGCCGAGTAC CATATTTGAA CTGGATAAAG GTTTTAAAAA CGGGTATCTT
CATCAGCTGA CAATTAAAGG AGTCGGTCAG GGACATGGTC TTGGGATGTC TCAACTGGGA
GCCTTAAAGC TGTCTGAAAA GGGCTATGAC TACAGGGATA TATTAAAGCA TTATTATAAA
AATGTAGAAG TAATTGACCT GACCGGTGAG ATAAAAGAAA AGGTCAGGGT TGAAGCCCGG
GTTATAAGAG GTCTTAGATA TTATGAAATT GAACAGCTTA CCTGGTGGGG GCCCCGGTTA
ATAACAATGC TTGACCTTGA TTTGAATAAT GACTTTTTAT ATGTGGAGCC ATTTCTGGCC
AGTGGAAAGT TGTCTGGTCT ATCTGATTTG AGTCAGGTAG TGTCCGGGAA AAAAGCCCTG
GCCGGAATTA ACGGGGGATT TTACAGTTAT ACAGGCCGTC CCCTGGGTTT ATTTATGATT
AATGGCGAGA TTGTTAGTGA GGATATTATG GGGAGAACAG CTCTGGTAAT AACTCCTGAT
GATATAATCA TTGACAGGAT AGACTGGACA GCCCGCTTAA CCAATACCAG GGGTGAAGAA
ATACTTATTG AAGGTGCTAA CAGGCGTCCC CGGACCGATG AAGCGGTTAT TATAAACAAA
TATTATGGCC AGGTAGCTCC TCCGGCCCGG GAATGGATAA CAGAGTTGGT AGTTTCCAAT
GGAGTAGTCC AGTCGATAAA AGACGGTAGC CCCGGGACAG TAATTCCAGA TAATGGGTTT
ATTATCCAGG CCCATGGGCA GTCCCGACAG TTTCTGAAAT TATTTAAAGA GGGAGATAAA
GTTGTATTGC AGAATAATTT CGGCCCGGGC CTCACAAATA AAGATATAAA GATGGCCCTC
GGAGCTGGAC CTACTTTGAT AAAAAATGGT AAAATATATA TTACAGGAAA GGCCGAAGGG
TTTCAGCCAG ATATTCTCAG GGGTAGGGCC CCCCGGACTG CTCTGGGGAT TACTTCCGGA
AACCATCTAA TAATGGTTAC TGTTGATGGA AGACAGCCCG GATTCAGTAT CGGGATGACT
CTGGAAGAAC TGGCCCAGTT TATGTTAAAA TATAATGTAG TACAGGCCAT GAATCTCGAT
GGTGGGGCTT CTTCCCGGAT GGTGGTCAGA GGTTATACAA TGAACAACCC CAGTGATAAA
AGGCTTATCA GTAATGGTCT ATTGATAAAG TACAGACAAT AA
|
|---|
| Protein sequence | MKKTAILHET IWPGHFLLIF LVILAGLFFI NIDVFALSQE MTQFIEDGKT INVKIEENIT
RLTLTPQSDI EVYDYTTKKN YRLKRGEVYT LRVTGVGPTR SLGYRVQVFA SFDKNKSLNV
KNQLQEAGYQ KVFIVRDGKW YKVQIGDYSS REKAGEVASK LNGEGWETWV VSGPFTPRSG
NWIEIFYKKE VIFRGKVLEL GGEVKIENYG LFPGKTEIVM SGHSLTVYNL VPLRDLLYGL
VAGELSIKDR KHLEAAKAQA VASRSFILHE LFYGNEEVFT FNNYRGLEGV NYLAKMAVNL
TSGEVLVYDG RIIKAVYHED SGGLTADSKD VLAEEIPYLK PVTDGLKSKI WNKVFSGHEL
EKRLTGLLKD KLDLEILCPG IRDIKTVTDE NGRVIRVDFV TDFGIYSVYK DNIRSFFSTT
EGLLPSTIFE LDKGFKNGYL HQLTIKGVGQ GHGLGMSQLG ALKLSEKGYD YRDILKHYYK
NVEVIDLTGE IKEKVRVEAR VIRGLRYYEI EQLTWWGPRL ITMLDLDLNN DFLYVEPFLA
SGKLSGLSDL SQVVSGKKAL AGINGGFYSY TGRPLGLFMI NGEIVSEDIM GRTALVITPD
DIIIDRIDWT ARLTNTRGEE ILIEGANRRP RTDEAVIINK YYGQVAPPAR EWITELVVSN
GVVQSIKDGS PGTVIPDNGF IIQAHGQSRQ FLKLFKEGDK VVLQNNFGPG LTNKDIKMAL
GAGPTLIKNG KIYITGKAEG FQPDILRGRA PRTALGITSG NHLIMVTVDG RQPGFSIGMT
LEELAQFMLK YNVVQAMNLD GGASSRMVVR GYTMNNPSDK RLISNGLLIK YRQ
|
|---|
| |