| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16440 |
|---|
| Symbol | |
|---|
| ID | 7313161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1766491 |
|---|
| End bp | 1769028 |
|---|
| Gene Length | 2538 bp |
|---|
| Protein Length | 845 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643612091 |
|---|
| Product | preprotein translocase, SecA subunit |
|---|
| Protein accession | YP_002509388 |
|---|
| Protein GI | 220932480 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000273245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTAAAAT TTATAAAAAA TATCTTTAAA GATTCAAATA CCCGGGAACT GGAAAAATTA
CAGCACATTG TTGATGAGAT TAACAGTCTT GAACCCTATA TGAAGAAGCT TTCAGATGAG
CAATTGAGGG ATAAAACCAG AGAATTTAAG GAACGGATTG TAAAAGGTGA AACCCTTGAT
GAATTATTAC CGGAAGCCTT TGCTGTAGTC CGGGAAGCGG CCCAGAGGTC TACTTCAGAA
AAATTCAGAC ACTATGATGT CCAGCTTATG GGTGGTATTG TGTTACACCA GGGTAAAATT
GCCGAAATGA AAACCGGTGA GGGGAAAACC CTGGCTGCCA CTTTGCCGGT ATATCTCAAT
GCCCTGACCG GTAAAGGTGT TCATGTGGTT ACTGTTAATG ACTATCTTGC TAAAAGGGAT
AGTGAATGGA TGGGACAAAT ATACCGGTTT TTAGGCCTGT CTGTTGGTGT TATTTTAAAC
GGGATGACTC CCCGGGAAAG AAAAAAGGCC TACCAGGCAG ATGTAACCTA TGGTTCCAAT
AATGAATTTG GGTTTGACTA TCTCCGTGAT AACCTGGCCT ATAATCCTGA TGATGTCGTA
CAGGGGGAAC TACATTATGC CATTCTTGAT GAAGTTGATA GTATTCTAAT AGATGAAGCC
AGGACCCCCC TTATTATTTC AGGGCCGGCT CAGGAGACAA CTAAAGATTA CCGGAAGTTT
AACCGGATTA TCCCCAGGCT TGTAAAAGGT AGGGACTATG AGGTTGATGA GAAAAACAGG
ACCGTCCATT TAACAGAAGA GGGCCTGGCC CGGGTGGAAA AAAAGTTAAA TATCTCAAAC
CTCTATGATG ATCAAAACTT CCAGCTTGCC CATCAGCTAA ATCAGGCCTT AAAGGCCCAT
ACCCTGATGA AAAAAGACCG GGATTATATT GTTAAAGATG GAGAAGTTAA AATTGTAGAT
GAATTTACCG GACGAATTAT GGAAGGCAGG AGGTTTAGTG AAGGGCTCCA CCAGGCCATA
GAGGCTAAAG AGGGTGTTGC CGTCAATAAG GAAAGCCAGA CGTTTGCCAG TATAACCTAT
CAGAATTTTT TCAGAATGTA TGATAAACTG GCCGGTATGA CCGGTACGGC AGCCACTGAA
GAAGAAGAGT TTATTAAAAT CTATGGCATG GAAGTTGTCC AGATACCTAC CAATAAACCA
ATGATCAGGG AGGACCTTCC TGATGTTGTA TTCAGGACCG AGGAGGCCAA GTTTAAAGCT
GTTGCTGAAG AAGTAGCCCT TAAATATAAA AAAGGACAAC CGGTCCTGGT CGGTACTGTT
GATATCGAAA AATCGGAAAA GTTAAGTAGA ATGCTGAAGA GAAAAGGTAT TCCCCACCAG
GTCCTGAATG CCAAGAACCA TGAAAAGGAA GCAGAAATTA TTAAAAAGGC CGGTCAAAAG
AATAGTGTTA CCATTTCTAC AAATATGGCC GGGCGTGGTA CGGATATTGT GCTCGGTGAA
GGTGTAAAAG AATTGGGAGG ACTCCATGTC ATCGGAACCG AAAGACATGA AAGCCGCCGT
ATCGATAACC AGTTGCGGGG GCGTTCCGGA AGGCAGGGAG ATCCCGGTTC ATCCCAGTTT
TTCGTATCAC TGGAGGATGA CCTCCTGAGA TTGTTTGGCT CTGATAATAT AAGTATGTTA
ATGGACCGGA TGGGATTTGA TGATGACCAG CCCATTGAGC ATAAAATGAT AACAAGATCC
CTGGAAAGGG CCCAGAAAAA GGTCGAAGGA AGAAATTTCG AAATACGTAA GACCATCCTT
GAATATGATA ATATTATGAA TAAACAGCGG GAAATAATCT ATGAGCAGAG GAAGAAAATC
CTCTTTGCAT CTGACCTCAA GGAGTATATA ATGGGTATGA TAGAAATGCT GGTTGATGAT
ATTATGGATA CCTATCTTTC CAGTGAGGTC CATCCCGATG ACTGGGATAT AGACGGTCTG
ATTAAATACC TGTCTGAATT TAATCTGGTC AATATTAATG AAGAGGACTT CAAGGATAAG
GATCGGGAAA AAATAAGAGA AGAATTAATT AAAATTGCCA CAAAAACCTA TGAAGAAAAA
GAAGCTGAGA TAGGTAAGGA GTCCATGCAA AAGCTGATCA AGAACCTGGC CCTCAGAATC
ATTGACCGGA ACTGGATGAA TCACCTGGAT AATATGGATG AATTGAGACA GGGTATTGGT
TTAAGGGCAT ATGGCCAGCG GGACCCGTTA ACAGAATATA AATTTGAATC CTATGATATG
TTTAATGGTA TGACGGGAAC TATCAGGGAA GAGATAATTA AAAACTTATT CCGGATTGAA
GTAAAGGAAC GGGAAATAAA TTTAGATCCC ATTATGTTAA AGAGGTTGAA ATACCGCCGT
AACTTTTTAT CAAACCGGGC AAACAGGCCC CAAAAGAAGG CTAAAAGACA GCCCATTGTA
AAACCTGATA AACCTGGGAG AAATGATCCC TGCCCCTGTG GTAGTGGCAA AAAGTATAAA
CACTGTTGTG GGAGGTAA
|
|---|
| Protein sequence | MLKFIKNIFK DSNTRELEKL QHIVDEINSL EPYMKKLSDE QLRDKTREFK ERIVKGETLD
ELLPEAFAVV REAAQRSTSE KFRHYDVQLM GGIVLHQGKI AEMKTGEGKT LAATLPVYLN
ALTGKGVHVV TVNDYLAKRD SEWMGQIYRF LGLSVGVILN GMTPRERKKA YQADVTYGSN
NEFGFDYLRD NLAYNPDDVV QGELHYAILD EVDSILIDEA RTPLIISGPA QETTKDYRKF
NRIIPRLVKG RDYEVDEKNR TVHLTEEGLA RVEKKLNISN LYDDQNFQLA HQLNQALKAH
TLMKKDRDYI VKDGEVKIVD EFTGRIMEGR RFSEGLHQAI EAKEGVAVNK ESQTFASITY
QNFFRMYDKL AGMTGTAATE EEEFIKIYGM EVVQIPTNKP MIREDLPDVV FRTEEAKFKA
VAEEVALKYK KGQPVLVGTV DIEKSEKLSR MLKRKGIPHQ VLNAKNHEKE AEIIKKAGQK
NSVTISTNMA GRGTDIVLGE GVKELGGLHV IGTERHESRR IDNQLRGRSG RQGDPGSSQF
FVSLEDDLLR LFGSDNISML MDRMGFDDDQ PIEHKMITRS LERAQKKVEG RNFEIRKTIL
EYDNIMNKQR EIIYEQRKKI LFASDLKEYI MGMIEMLVDD IMDTYLSSEV HPDDWDIDGL
IKYLSEFNLV NINEEDFKDK DREKIREELI KIATKTYEEK EAEIGKESMQ KLIKNLALRI
IDRNWMNHLD NMDELRQGIG LRAYGQRDPL TEYKFESYDM FNGMTGTIRE EIIKNLFRIE
VKEREINLDP IMLKRLKYRR NFLSNRANRP QKKAKRQPIV KPDKPGRNDP CPCGSGKKYK
HCCGR
|
|---|
| |