| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16350 |
|---|
| Symbol | |
|---|
| ID | 7312671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1757029 |
|---|
| End bp | 1758168 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643612082 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_002509379 |
|---|
| Protein GI | 220932471 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000000563274 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAGT ATCTTAATAC AGTGTTGGTT CTGGTAATAT TATTATTTAC CATAAATTTT
TCTGCTTTTG CTGAGGAGGA ATATACATCC ATAGATGCCT TTCAGGATGT TATTTATCTA
ATAAAAAATT ATTATGTTGA AGATGTCAAG CTGGATAAGC TGATGCGGGG TGCTATCAAG
GGAATGGTGG ATTCTCTGGA TCCGTATTCC GGGTATTTGA CCCCTGAGGA ATATGAGGAC
ATGCAGTTTG AATTTGAAGG CCATTATGGT GGTATTGGTA TAGTAATCAG CACCTATGAT
GACAAGTTAA CTGTGGTTCA GCCTTTCAAA AACACTCCTG GTGATAAAGC TGGCTTAAAA
TCAGGTGACA TCATTGTTGC CATTGATGGA AAACCAACTA AAGATATGCC CCAGGAGAAA
GCTGTAAACC TTATGCGGGG CAAACCCGGT ACCAGAGTTA TCCTAACTAT AAAACGGGAA
AATAAAAAAG AACTCTTTGA TGTTGAAATT ATCAGGGCTG ATATAGAGAT TCCATATGTA
GAATGGGAAA TGAAAGATGA TAAGATTGGC TATATTGTGA TTCATCAGTT TGTTGAGAAT
ACAGGTCAGA AAGTTAGAAG GGGTTTACTG GAGCTGATGT CAAAAGGGGC GAAAGGAGTA
ATCCTCGATT TACGTAATAA TCCTGGAGGA TTGTTAACAG AAGCTATAAC AGTTACCAGT
AATTTTGTTG AAAATGGAGA AGTAGTCTCC ATAAAGCAGA GAAACGGCCA GGAGAAGAGT
TTTAAAGTCG AATCTAACAT TTCCAGTATA GATTTACCCC TTGTGGTTCT GGTTAATGGA
TATAGTGCCA GTGCCTCTGA AATTGTGGCC GGTGCTATTC AGGATCATAA CCGGGGAACA
GTAATGGGAA CGACAACCTA TGGCAAGGGA ACGGTTCAAA CGGTAATACC CCTTGATGAC
GGTTCGGCTC TCCGCCTGAC TACAGCCAAT TATTTTACAC CTGAGGGAAG GTATATCCAT
GAAAAGGGGA TTAAACCAGA CATTACTGTC GAGTATGATT CTGAAAGTAA AGTTGATAAC
CAGCTGGAAA AGGCTATCAA ATATATTAAA TCCCTGGTGT CGGAAAGGAT GGCCAGTTAA
|
|---|
| Protein sequence | MKKYLNTVLV LVILLFTINF SAFAEEEYTS IDAFQDVIYL IKNYYVEDVK LDKLMRGAIK
GMVDSLDPYS GYLTPEEYED MQFEFEGHYG GIGIVISTYD DKLTVVQPFK NTPGDKAGLK
SGDIIVAIDG KPTKDMPQEK AVNLMRGKPG TRVILTIKRE NKKELFDVEI IRADIEIPYV
EWEMKDDKIG YIVIHQFVEN TGQKVRRGLL ELMSKGAKGV ILDLRNNPGG LLTEAITVTS
NFVENGEVVS IKQRNGQEKS FKVESNISSI DLPLVVLVNG YSASASEIVA GAIQDHNRGT
VMGTTTYGKG TVQTVIPLDD GSALRLTTAN YFTPEGRYIH EKGIKPDITV EYDSESKVDN
QLEKAIKYIK SLVSERMAS
|
|---|
| |