| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16220 |
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| Symbol | |
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| ID | 7312658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1740648 |
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| End bp | 1743473 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643612069 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_002509366 |
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| Protein GI | 220932458 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.266346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAGG AAATGATTTA TGTTAAGGGA GCCCAGGAGC ATAATTTAAA GAATATTGAT
GTCAGGATTC CAAGGGATAA ACTTATAGTT ATAACCGGTT TGAGTGGTTC TGGTAAATCT
TCACTGGCTT TTGATACCAT TTATGCTGAG GGTCAAAGGC GTTATGTCGA GTCTCTATCA
GCCTATGCCC GGCAGTTTTT AGGACAGATG GAAAAACCCC GGGTTGAATA TATAGAAGGT
TTATCTCCTG CTATTTCAAT TGATCAGAAA ACCACCAGTA AAAACCCCCG TTCCACAGTC
GGTACTGTTA CTGAAATCTA TGACTATCTG CGCCTTCTGT ATGCCAGAAT AGGAAGGCCC
CACTGCCCCG AATGCGGGCG GGCTATCTCA TCCCAGAGTG TTGATGAGAT AGTGGATCAG
GTTCTGGATC TACCGGGAAG GACCAAAATA CAGATTCTGT CACCGGTGGT CAGGGGAAGA
AAGGGTGAGC ATCAGAAGGT ATTTACAAGG GCCCTGAGGG ATGGTTTTGT CAGGGCCCGG
GTAGATGGAA GGGTCATCAT TCTGGGGGAA GAAGAGGTTA GCCTTGAGAA AAATTTAAAA
CATGATATTG AAGTTGTCGT CGATAGACTG GTTATTAAAG AAGGTATCCG GGAGCGATTG
ACCGATTCCA TTGAGACTGC CCTGGAATAC AGTGAAGGGC TGGTCATTGT AGATGTTATC
GATGGAGATG AAATGGTATT TAGTGAGAAA TTTGCCTGTC CCGAATGTGG TATCAGTCTG
GAAGAAATGT CTCCCCGGAT GTTTTCTTTC AACAGCCCCT ATGGGGCCTG TCCCAATTGT
GATGGACTGG GTATAAAAAA GGAATTTGAT CCTGATCTTA TCCTTGATAA GGAAAAATCC
ATCAGTAACG GGGCCATTAT TCCCTGGCGT AATTCAACAA GTCGTTATTA TCCTCAGCTC
CTGTCAGCCC TGGCTGAAGA GTATAACTTC AGCCTGGATA CCCCCCTGGA GCAACTGGAT
GATGACATCA TAGATATTAT TCTGTACGGT TCGGACAGGC AACTTGTTTT TCCCTATACC
AACCGCTATG GGAGAACCAG GCAGCATAAA ACCTATTTTA AGGGGATAGT TGGTTATTTA
AAAAGGCGGG TTAATGAATC TGACTCTCCG ACAGCCCATC GCAGGCTGGA AAGATATATG
AGTGAACGGC CCTGTTCTAC CTGTCAGGGG GGCCGGTTGC GGCCTGAGGT TCTGGCTGTG
ACGGTCGGGG GTAAATCAAT TGCCGAATTT ACCCGTTATT CAATTAAGGA AGCCTATGAT
TTCATAGAAG AATTAAATTT AACAGAAAGG GAACAGTATA TAAGTCAGGA AATTATTAAA
GAGATTAAAA ACAGGTTACG GTTTTTAATA GATGTTGGTC TGGACTATCT TACCCTGGAC
CGGCCGGCCG GGAGTTTGTC CGGGGGTGAG GCCCAGCGAA TCAGGCTGGC TACCCAGATT
GGTTCAGGAC TGGTAGGGGT TTTATATATT CTAGATGAAC CGAGTATAGG GCTCCACCAG
AGGGATAATA ACCGTTTAAT AAGAACCCTT GAACATATCA GGGATCTGGG GAATACGGTT
ATTGTTGTTG AACATGATGA AGATACCATC AGGGCAGCTG ACCACATTAT TGACATCGGT
CCCAGGGCCG GTAAACACGG TGGCCGGGTG GTAGCCCAGG GTTCTCTGGA AGACATTGTT
TCCAGTAAAG AATCCCTGAC CGGTCAGTAT TTATCTGGAG AAAAGAAAAT ACCGGTACCT
GAAAAGAGGG TTAGACCCAA TGGTAAATAC CTGGAGATTA AGGGGGCCAG GCAGCATAAC
CTTAAAAATA TAGATGTCAA AATCCCCCTG GGGACTTTTA CCTGTGTTAC CGGTGTTTCC
GGTTCAGGGA AGAGTACCCT GATTAATTTG ACTTTGAAAC GAAAGTTAAT GCAGCATTTT
TATGATTCCA CCCTGAGGCC GGGTGAACAT GATGAAATAA AGGGGCTGGA GTATGTCGAT
AAGATTATTA ATATAGACCA GTCACCCATA GGCAGGACCC CTAGGTCAAA TCCAGCAACC
TACACCAAGG TTTTTGATTA TATCCGGGAT GTGTTTGCCA AAACCCCCGA GGCCCGGAGG
ATGGGGTATA AGAAGGGGAG GTTCAGTTTT AACGTAAAAG GGGGCCGTTG TGAGGCCTGT
AAAGGTGATG GCATAATCAA GATAGAAATG CATTTTCTGC CTGATGTTTA TGTCCCCTGT
GAGGTATGCG GGGGTAAAAG ATATAACCGG GAGACCCTGG AGATAAAATA TAAGGGAAAA
ACAATAGCAG ATATACTCGA GATGACGGTT GAGGAAGCCC TGGAGTTTTT TGCCAATGTC
AATCCGATAA AGAGGCGGTT ACAGACCCTT TATGATGTTG GTCTCGGTTA TATTCGACTG
GGTCAACCGG CAACAACTTT ATCCGGGGGT GAGGCCCAGA GGATAAAGAT TGCCTCTGAA
CTGGGAAAAA GGAGTACCGG AAAGACCATC TATATTCTGG ATGAACCAAC TACCGGTCTG
CATTTTGAGG ATGTAAAGAA ACTTCTTGAA GTACTCTTCA GACTCCGGGA AGGTGGTAAT
ACCGTCATTG TAATAGAGCA TAACCTTGAT GTTATAAAAG CTGCCGATTA TATCATAGAC
CTTGGCCCTG AAGGAGGGGA CCGGGGAGGG CAGGTTATTG CTACCGGAAC CCCGGAAGAG
GTTGCAGCCA ACCCTGAATC TTATACGGGA CAGTTTTTAA GTAAATATCT CAATAATAAA
TGGTGA
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| Protein sequence | MVKEMIYVKG AQEHNLKNID VRIPRDKLIV ITGLSGSGKS SLAFDTIYAE GQRRYVESLS
AYARQFLGQM EKPRVEYIEG LSPAISIDQK TTSKNPRSTV GTVTEIYDYL RLLYARIGRP
HCPECGRAIS SQSVDEIVDQ VLDLPGRTKI QILSPVVRGR KGEHQKVFTR ALRDGFVRAR
VDGRVIILGE EEVSLEKNLK HDIEVVVDRL VIKEGIRERL TDSIETALEY SEGLVIVDVI
DGDEMVFSEK FACPECGISL EEMSPRMFSF NSPYGACPNC DGLGIKKEFD PDLILDKEKS
ISNGAIIPWR NSTSRYYPQL LSALAEEYNF SLDTPLEQLD DDIIDIILYG SDRQLVFPYT
NRYGRTRQHK TYFKGIVGYL KRRVNESDSP TAHRRLERYM SERPCSTCQG GRLRPEVLAV
TVGGKSIAEF TRYSIKEAYD FIEELNLTER EQYISQEIIK EIKNRLRFLI DVGLDYLTLD
RPAGSLSGGE AQRIRLATQI GSGLVGVLYI LDEPSIGLHQ RDNNRLIRTL EHIRDLGNTV
IVVEHDEDTI RAADHIIDIG PRAGKHGGRV VAQGSLEDIV SSKESLTGQY LSGEKKIPVP
EKRVRPNGKY LEIKGARQHN LKNIDVKIPL GTFTCVTGVS GSGKSTLINL TLKRKLMQHF
YDSTLRPGEH DEIKGLEYVD KIINIDQSPI GRTPRSNPAT YTKVFDYIRD VFAKTPEARR
MGYKKGRFSF NVKGGRCEAC KGDGIIKIEM HFLPDVYVPC EVCGGKRYNR ETLEIKYKGK
TIADILEMTV EEALEFFANV NPIKRRLQTL YDVGLGYIRL GQPATTLSGG EAQRIKIASE
LGKRSTGKTI YILDEPTTGL HFEDVKKLLE VLFRLREGGN TVIVIEHNLD VIKAADYIID
LGPEGGDRGG QVIATGTPEE VAANPESYTG QFLSKYLNNK W
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