Gene Hore_16170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16170 
Symbol 
ID7312653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1733741 
End bp1734583 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content43% 
IMG OID643612064 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002509361 
Protein GI220932453 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3833] ABC-type maltose transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0163255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGATT CTTATAAAAC ACGGAATACT ATTAAATTGA CATTTACATA CCTGTTCATT 
GGGATAATGA TTCTGATAGC CTTATTTCCG GCCCTCTGGA TTTTCAGTGG TTCTTTAAAT
CCGGGTCATA GCCTCTTTTC AACTAAATTT ATTCCTGAAA ATGCTACCTT TATTCACTAT
AAAGAGCTTT TCCAGGAAAC AGATTTCGGT ATCTGGTATA TCAATACCCT GAAAGTTGGT
GCCGGAACTG CGATACTGGG TGTTTTCCTG GCTTCCCTTA CCGCCTATGC CTTTTCACGG
TTAAAGTTTG CCGGACGTAA AGTTGGGATG ATGGTCATGC TGATCATCCA GGTCTTTCCG
GGTGTTATGT CCATGGTAGC CCTGTATGTT TTGCTTAATC TAGTTGAATT ACTGGATACC
CATATCGGGT TGATTATAAT ATATGCCGCG GGTACGGTAC CTTATCATTC ATGGTTGATG
AAGGGTTATC TCGATACAAT TCCCAAGTCC CTTGAAGAAG CAGCCATTAT TGATGGTGCC
AGTCACTGGA AAATCTTCTG GACAATTATA TTACCCCTGG CGATACCGAT GTTATCTGTC
CTGGCCCTTT TTTACTTTGT AGCTCCTTTC GGTGATTTCC TCTTTGCCCG GCTGGTAATC
ACCAGTCCTG ATAAATGGAC TCTGGCTCTG GGCCTGTATG AATTTGTTGT TGACCAGTAT
GGAAAGAACT TTACAATCTT TGCAGCCGGT TCCCTGCTGG CAGCAATTCC CATCCTTATC
CTGCATCTAA GCATGCAAAG CATGCTGGTC AGTGGGTTAA CCAGGGGAGC CAACAAAGGA
TAA
 
Protein sequence
MIDSYKTRNT IKLTFTYLFI GIMILIALFP ALWIFSGSLN PGHSLFSTKF IPENATFIHY 
KELFQETDFG IWYINTLKVG AGTAILGVFL ASLTAYAFSR LKFAGRKVGM MVMLIIQVFP
GVMSMVALYV LLNLVELLDT HIGLIIIYAA GTVPYHSWLM KGYLDTIPKS LEEAAIIDGA
SHWKIFWTII LPLAIPMLSV LALFYFVAPF GDFLFARLVI TSPDKWTLAL GLYEFVVDQY
GKNFTIFAAG SLLAAIPILI LHLSMQSMLV SGLTRGANKG