Gene Hore_16130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16130 
Symbol 
ID7312649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1728695 
End bp1729933 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content45% 
IMG OID643612060 
ProductGlycine hydroxymethyltransferase 
Protein accessionYP_002509357 
Protein GI220932449 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT TAAAAAAAGT TGACCCGGAT ATTTTCGGGT TAATCGAGGA AGAGGATCAA 
CGACAGCGCC GGAACATTGA ACTTATTGCT TCAGAAAATT TTGTAAGTGA TGCCGTTATG
GAGGCAGCCG GTTCCTGCTT AACCAATAAG TATGCAGAAG GTTATCCCCA TAAGAGGTAT
TACGGGGGAT GTGAGGTAGT CGATAAGGTT GAGGAACTGG CAATAGCCAG GGCCAGGGAG
TTATTCGGAG CGGAGCATGT TAATGTCCAG CCCCACTCAG GGTCTCAGGC CAATCAGGCT
GTTTATTTCG CTACTGTACC TCCCGGAGGG ACTATACTGG CCATGGATTT AACCCATGGG
GGCCATCTTA CCCATGGTAG TCCTGTAAAT ATGTCCGGCA AGTATTATAA TTTCATCCAT
TATGGAGTTA CCAGAGAAGA GGAGGTAATT GACTTTGATC AGGTCCGGGA ACTGGCCAGA
AAGCACCAAC CTGATTTAAT TGTGGCCGGG GCCAGTGCCT ATCCCAGGAT AATTGATTTT
GAAGTCTTCA GGGAGATTGC CGATGAGGTT GGGGCTCTGT TTATGGTGGA TATGGCCCAT
ATTGCTGGCC TGGTGGCAGC GGGCTTACAT CCGAGTCCAG TACCGGTAGC CGATTTTGTG
ACAACAACAA CCCATAAAAC ACTGAGGGGA ACCAGAGGGG GATTAATTCT CTGTAAAGGG
GAACACGCTA AAAAAATAGA TAAGGCTATA TTCCCGGGAT TACAGGGAGG CCCTCTTCTT
CATATTATTG CGGCCAAGGC AGTAACGTTC AAAGAAGCTC TACAGGATGA ATTTAAAGGC
TATCAGAAAC AGATTGTGAG TAATGCTAAA ACTATGGCAG CTGAATTGAA AAATTATGGG
TTCAGACTGG TTTCAGGTGG TACCGATAAT CATCTGATGC TGGTTGATCT CACCAATATG
GACATAACTG GAAAGGATGC TGAAACTGCC CTTGATAAAG TGGGTATCAC TGTTAATAAA
AATACAATAC CCTTTGAAAA GAGGAGTCCC TTTGTTACCA GTGGTATTAG AATTGGGACT
CCGGCCGTAA CCACCAGGGG TATGAAAGAA AAAGAAATGA AGTTGATTGC AAAGTTAATA
TACCAGACCC TTAAGAATAT AAATGATGAA GGAAGGCTGA CCGAAATCAG GCAAGAAGTT
TACAGGCTTT CTGAAAGGTT TCCAAAGACA GCGGAATAA
 
Protein sequence
MEFLKKVDPD IFGLIEEEDQ RQRRNIELIA SENFVSDAVM EAAGSCLTNK YAEGYPHKRY 
YGGCEVVDKV EELAIARARE LFGAEHVNVQ PHSGSQANQA VYFATVPPGG TILAMDLTHG
GHLTHGSPVN MSGKYYNFIH YGVTREEEVI DFDQVRELAR KHQPDLIVAG ASAYPRIIDF
EVFREIADEV GALFMVDMAH IAGLVAAGLH PSPVPVADFV TTTTHKTLRG TRGGLILCKG
EHAKKIDKAI FPGLQGGPLL HIIAAKAVTF KEALQDEFKG YQKQIVSNAK TMAAELKNYG
FRLVSGGTDN HLMLVDLTNM DITGKDAETA LDKVGITVNK NTIPFEKRSP FVTSGIRIGT
PAVTTRGMKE KEMKLIAKLI YQTLKNINDE GRLTEIRQEV YRLSERFPKT AE