| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_15850 |
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| Symbol | |
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| ID | 7312621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1697994 |
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| End bp | 1699304 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643612032 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_002509329 |
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| Protein GI | 220932421 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA GGTTTGACCT TGATCTTAAT CAGAAACAGG AACTGGTGAT GACCCCGAAA
TTGAAGCTGG CTATAAAACT TTTGCAGTAT TCTTATCAGG AACTTGAGAA TTACCTTGAA
GAGGAGTTAA AGCGTAACCC CCTTTTAGAG AAAGAATCTT CAAATGGAGA TTATTTTCAG
AATCATAAGA ATTATTCCGA TTATGATTAT AGTAATGACA GAAATAGTGA TAATAATTAT
GAAAATTTTG TGACTTATAA AATTAATTTA ACGGAATACC TCGAGTCTCA GTTGTATCAG
GTCTGTGAAG ATCACGAACT TAAAATTGCA AGATATATCA TCGGTAACCT GGATGACAGG
GGTTATTTAA GGACGACAGT AAGTGAAATC GGTCATCATT TTAAGGTAGA AGAAAGTGAA
GTTGAGAAAG TTTTAAAGAA AGTGCAGCAG CTTGATCCAG TGGGGGTTGG GGCCCGGAAT
ATTAGAGAAG CCCTCCTGGT AAAGCTGGGA AATCTGGGAG ATGATGAAAA CACTGAAATA
GCTAAAAATA TTGTGACTAA CTTTCTGGAT GAACTGGCCT CGGGTAAAAT CAAGGAGATT
ATAAAAAAGA TTAAAAAGGA TAAAGAACAG GTTTTAAAGG CTATTAATTT AATAAAAGAG
CTGGAACCCT ACCCTGCTGC CGGTTTTGCT GCAAAAGAAA ATACCGGTTT TATTGTCCCT
GATGTTATTG TGAGAAAGGT TGAGGGGAAA TTTGTGGTTG AAATGAACAG TAGCTTAACT
CCCTCATTGA AAATAAACCC CTATTATTAT AAAATGCTAC AGGATGTTGG TGGGGAATCC
CGGGAATACC TGGAGAAAAA TTATAAGTCA GCCCTCTGGT TAATTAGATC AATAGAACAA
CGGCGAATAA CAATTTACCG CATAGCTATG GCTATTACCA ACCGTCAACA GGAATTTCTG
GAAAAGGGTA TAAAGTATTT AAAACCACTG ACTATGGAAG AGCTGGCTGA TACGCTGGGC
ATTCATGAAT CCACAGTAAG CAGGGCTACA ACCAGTAAAT ATATTCAAAC CCCACAGGGG
ATTTACGAAC TAAAGTTTTT TTTCAGTGGT GGGGTGAATG GGGTATCTAC AACCAGTATT
AAGGCCTATC TTAAGGAATA TATAGATAAA GAAGGGGCAA AAAATCCCCT GAGTGATAAA
AAACTGGCCA GAATTTTGAA AGATGAAATT GGTGTTAATA TTTCCAGGAG GACTGTAGCC
AAGTACCGGA AGCAAATGGG AATTCCTTCT TCCCGGAAAC GGAAGAAGTA A
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| Protein sequence | MDLRFDLDLN QKQELVMTPK LKLAIKLLQY SYQELENYLE EELKRNPLLE KESSNGDYFQ
NHKNYSDYDY SNDRNSDNNY ENFVTYKINL TEYLESQLYQ VCEDHELKIA RYIIGNLDDR
GYLRTTVSEI GHHFKVEESE VEKVLKKVQQ LDPVGVGARN IREALLVKLG NLGDDENTEI
AKNIVTNFLD ELASGKIKEI IKKIKKDKEQ VLKAINLIKE LEPYPAAGFA AKENTGFIVP
DVIVRKVEGK FVVEMNSSLT PSLKINPYYY KMLQDVGGES REYLEKNYKS ALWLIRSIEQ
RRITIYRIAM AITNRQQEFL EKGIKYLKPL TMEELADTLG IHESTVSRAT TSKYIQTPQG
IYELKFFFSG GVNGVSTTSI KAYLKEYIDK EGAKNPLSDK KLARILKDEI GVNISRRTVA
KYRKQMGIPS SRKRKK
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