Gene Hore_15840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15840 
Symbol 
ID7312620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1696800 
End bp1697825 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content42% 
IMG OID643612031 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_002509328 
Protein GI220932420 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACT TATTTAAGAT ACAGGAAAAA ATTGTCCCTG AAATAATATC CCTTGCCGAA 
GAAAGGTATA CTATACTCCG TAGTATTTAT TATAACCAGC CTATCGGGAG GAGATTGCTG 
GCAGAAAAAA CCACTTTGAG TGAACGTACT ATTAGAAATG AGCTTAATTT TCTGGAAACC 
AAGGGGCTGG TGGAGGTTTC CCGGTCGGGA ACGGTTATTA CCAGGACCGG TCAGGAATTC 
TTAAATGAAC TGGATAAATA TATAAAAGAA CTAAAGGGAT TGAAAAATTT AGAAGAAGAA 
GTAAAGAAAG TTCTGGGTTT GAAACAGGTT TTACTGGTTC CTGGAGGTCT CGAATATTCA 
ACGATTAAAC AGGAAATAGG TCGTTTTACA GCAAAGTATC TAAAGGGTCT CCTGAAAGAT 
GATGATATTC TGGCAGTGAC AGGGGGAACA ACCCTGGCCC AGGTTGCTAA TGCCATGAGG 
TCAACCAGTA ATCCGATGGA GGTTATGGTT GTTCCGGGAA GGGGAGGCCT CGGTGAAGAG 
GTTGAAATAC AGGCCAATAC TATTGCAGCC ACGATTGCTA AGAAAATTGG AGGAAAATAT 
CAGCTCCTCC ACCTTCCCGA TAATATAAAG GAAGAAAACG CAAACCGGAT TGTAGCGGAA 
CCTTCGATCC AGAAGACCCT GAACCAGTTA AAGAAGACAA ATATTCTTCT CCACGGTGTG 
GGGACTGCTG AGGAAATGGC CCAGAGAAGA GGAATGTCAC CTCAGCAGAT TAAGGCCCTT 
ATAGACAGGG GAGCTATTGG AGAAGCTTTT GGCTATTATT TTAATGAACA GGGAGATATA 
GTGTACACTA CCAGTAGTGT AGGGTTACAT TTAAATGATT TAACTAATAT AGATACTGTT 
ATTGCAGTAG CTGGAGGGCA GGAAAAAGCC CGGGCTATTA AGGCAGTTGT TTCACCTGAT 
TACCAGGATA TTTTAATTAC CGATGAGTTA ACAGCCAGGA GGATCCTGGA ACTTAAAGGG 
AGGTGA
 
Protein sequence
MNYLFKIQEK IVPEIISLAE ERYTILRSIY YNQPIGRRLL AEKTTLSERT IRNELNFLET 
KGLVEVSRSG TVITRTGQEF LNELDKYIKE LKGLKNLEEE VKKVLGLKQV LLVPGGLEYS 
TIKQEIGRFT AKYLKGLLKD DDILAVTGGT TLAQVANAMR STSNPMEVMV VPGRGGLGEE 
VEIQANTIAA TIAKKIGGKY QLLHLPDNIK EENANRIVAE PSIQKTLNQL KKTNILLHGV 
GTAEEMAQRR GMSPQQIKAL IDRGAIGEAF GYYFNEQGDI VYTTSSVGLH LNDLTNIDTV 
IAVAGGQEKA RAIKAVVSPD YQDILITDEL TARRILELKG R