Gene Hore_15360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15360 
Symbol 
ID7313129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1643890 
End bp1644522 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content42% 
IMG OID643611978 
ProductMethionine synthase 
Protein accessionYP_002509280 
Protein GI220932372 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATAT TGAATGAAAT ATCAGAACAT TTACAGGCCG GAGATGTAAA CGGGGTAACA 
GATGGTATTA AAAAGGCCCT GGATGATGGG GTGACCCCTA AAGAAATCTT GAATACTGGT
TTAATTGGCG GAATGAGTAT TATCGGTGAA AAATTCAAAA ACAATGAAGT ATTTGTTCCT
GAAGTATTGA TAGCAGCCCG GGCCATGAAT GCCGGTATGG ATATTTTGAA ACCAAAATTG
ATTGAAACCG GGGTTGATTA CATCGGTAAG TTTGTTATTG GAACGGTTAA AGGGGACCTC
CATGATATTG GTAAAAACCT GGTCAAGATG ATGTTTGAGG GTAACGGTTT TGAGGTAATT
GACCTGGGAA CAGATGTGGC TCCAGAACAA TTCGTGGCAG CTGTTAAGGA GCATAAACCC
GATATTGTAG GTATGTCTGC TTTATTAACA ACAACAATGC CTGAGATGGA AAACACTATT
AAAGCCCTCA AAGATGAGGG GCTCCGGGAT GATGTAGCGG TTATGATTGG AGGGGCTCCT
GTTACTGATA AGTTTGCCAG TGAAATCGGG GCTGATGCCT ATGCTAAAGA TGCGGCTACC
GCGGCTACAA TGGCCAAAAA ATTCCTGTCT TAA
 
Protein sequence
MGILNEISEH LQAGDVNGVT DGIKKALDDG VTPKEILNTG LIGGMSIIGE KFKNNEVFVP 
EVLIAARAMN AGMDILKPKL IETGVDYIGK FVIGTVKGDL HDIGKNLVKM MFEGNGFEVI
DLGTDVAPEQ FVAAVKEHKP DIVGMSALLT TTMPEMENTI KALKDEGLRD DVAVMIGGAP
VTDKFASEIG ADAYAKDAAT AATMAKKFLS