Gene Hore_15050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15050 
Symbol 
ID7313098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1607699 
End bp1608805 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content30% 
IMG OID643611948 
Productregulatory protein GntR HTH 
Protein accessionYP_002509250 
Protein GI220932342 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.34825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGA ATAGAAAGAG TGATAAACCG TTATATAAAC AAATTGAAGA TATCATTATA 
AATAAAATTA AGGACGGGAT TTTAAAACCT GGTAAGGCTT TACCATCAGA AAGGGAACTA
GGTAAAGAAT TAGAAGTTAG CAGGTTAACT GTAAGAAAAG CAATTCAGGA GCTGGAACAA
AAAGGTATTT TATATAAAAT TCAGGGTAAG GGAACTTTTG TTAACGATAG GAAAAAAGCT
GGAGAACATG GCAATAAAAT TGGTGTTATA TCACATTTGT ATAAAGGTGT TTTCATGGAG
ATACTTGAAG GTATTGAAGA AGGTCTTGAG TCTGAAAGTT ATGAATATCT ACTTCGTAAT
TCCCAAAATG ATTATAAAAA GGAAGAGAAT ATAATTCAAG CAATGAAAGA GGAGGGAGTA
AGTGGTTTTA TTATTAGTCC TGTAGAAGAT CAGAAAGATA GTAATGTTAT ATTTAACTTG
AAGGCAGAAG GTTATCCTAT TGTATTAATA GATAGAAAAC TTAATTATTG TGAAACAGAC
TGTGTTTTAT CAGATAATAT AGATGGTGGT TTTAAAGCAA CTGAATATTT AATAAAACTT
GGTCATAGTA GAATTGCGTT TTTAACCTAC GAATTTAGAA AAACAAGTAG TGTTAGAGAC
AGGATTAAAG GATATAGGTA TGCATTAAAG CTTAATCAGT TGGAATTAGA TGAAAGGTTA
TTATTTTCTT ATAATAAAGA CCTTTCCAGA GAAGAAAAAA ATAAGATATT ATACAATTTC
ATTAAAGAAA ATAAACCTAC CGCCATTATA GGTGTTCATA ATGATGTTGC CCTGGATGTG
GTTAAAATGT GTAGGGCCAA TAACATAAGT ATTCCTGAAG ATATTTCTAT AATTTGTTTT
GATAACACAG ATATTGTTAG ACATTTAGAG GTTCCCCTGA CTACCCTTGT TCAGGATGCT
AGAAAAATAG GTTATGATGC TGCCAAACTT ATTGTCAAGA AAATTAATTC TCAAGAAGAA
ACAGGTATAA TGAATCAAAT ATATCATCCA GTAAAATTGA TTGAAAGAAA TTCATGTAAA
AGTATCCTTC AAAAAAATGA AAAATAA
 
Protein sequence
MELNRKSDKP LYKQIEDIII NKIKDGILKP GKALPSEREL GKELEVSRLT VRKAIQELEQ 
KGILYKIQGK GTFVNDRKKA GEHGNKIGVI SHLYKGVFME ILEGIEEGLE SESYEYLLRN
SQNDYKKEEN IIQAMKEEGV SGFIISPVED QKDSNVIFNL KAEGYPIVLI DRKLNYCETD
CVLSDNIDGG FKATEYLIKL GHSRIAFLTY EFRKTSSVRD RIKGYRYALK LNQLELDERL
LFSYNKDLSR EEKNKILYNF IKENKPTAII GVHNDVALDV VKMCRANNIS IPEDISIICF
DNTDIVRHLE VPLTTLVQDA RKIGYDAAKL IVKKINSQEE TGIMNQIYHP VKLIERNSCK
SILQKNEK