Gene Hore_14740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_14740 
Symbol 
ID7314015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1567871 
End bp1569418 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content41% 
IMG OID643611915 
Productalpha amylase 
Protein accessionYP_002509218 
Protein GI220932310 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0597647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCTAA AACGCTTGTC TTTCTTCATG TTTGTTACCT TACTGGTATT TATATCTGTT 
TTTCCTGTTT ATGCAAACGA TTTCGAAAAA CATGGTACAT ATTATGAAAT TTTTGTCAGG
TCTTTTTATG ACTCTGATGG TGACGGAATA GGGGATTTGA AAGGTATAAT AGAAAAACTG
GATTATCTTA ATGATGGAGA CCCTGAAACC ATTGCTGATC TGGGGGTTAA TGGTATCTGG
TTAATGCCTA TCTTTAAATC TCCCTCCTAT CATGGCTATG ATGTAACCGA TTATTATAAG
ATTAATCCTG ACTACGGGAC TCTGGAAGAC TTCCATAAGC TTGTTGAGGC TGCCCATCAA
AGGGGAATCA AGGTTATAAT TGATTTACCC ATCAATCATA CCAGTGAAAG ACATCCCTGG
TTTCTCAAGG CTTCCCGGGA TAAGAATAGT GAATACAGGG ATTATTATGT CTGGGCTGGC
CCCGATACCG ATACCAAAGA AACCAAGTTA GATGGAGGCC GGGTCTGGCA TCATTCCCCG
ACCGGTATGT ATTATGGGTA TTTCTGGAGT GGCATGCCTG ATTTAAACTA TAATAACCCT
GAAGTTCAGG AAAAGGTTAT TGAGATAGCA AAATACTGGT TAAAACAGGG GGTTGATGGT
TTCAGGCTTG ATGGAGCCAT GCATATCTTC CCACCGGCCC AGTATGATAA AAACTTTACC
TGGTGGGAGA AGTTCCGTCA GGAAATTGAA GAGGTAAAAC CCGTTTACCT GGTGGGTGAG
GTCTGGGATA TTTCGGAAAC GGTAGCTCCT TACTTCAAAT ATGGTTTTGA TTCTACCTTT
AACTTTAAAC TGGCAGAGGC AGTTATCGCT ACGGCTAAAG CTGGATTTCC CTTTGGTTTT
AATAAAAAGG CAAAACATAT TTACGGGGTA TATGACAGGG AGGTTGGATT TGGGAATTAT
ATCGATGCTC CCTTCCTGAC CAACCATGAT CAGAACCGGA TTTTGGACCA GCTTGGGCAG
GATCGTAATA AGGCCAGGGT TGCTGCCAGT ATTTATTTGA CCTTGCCTGG TAATCCCTTT
ATTTACTATG GTGAAGAAAT CGGTATGAGG GGGCAGGGGC CCCATGAAGT TATCAGGGAG
CCCTTCCAGT GGTATAATGG ATCCGGGGAG GGAGAAACAT ACTGGGAGCC AGCCATGTAT
AATGATGGCT TTACTTCTGT TGAACAGGAA GAAAAGAATC TCGATTCCCT CTTAAATCAC
TACAGGAGGT TAATCCATTT CCGGAACGAA AATCCTGTCT TTTATACCGG TAAGATTGAG
ATTATAAATG GAGGATTAAA TGTAGTTGCA TTTAGAAGAT ATAATGATAA GAGGGATTTA
TATGTCTACC ATAACCTGGT AAACAGACCG GTTAAAATAA AAGTGGCTAG TGGTAACTGG
ACCTTATTGT TTAATTCAGG TGATAAGGAA ATTACCCCTG TTGAAGATAA TAATAAACTT
ATGTATACTA TCCCTGCTTA TACTACCATT GTTCTGGAAA AGGAGTAA
 
Protein sequence
MKLKRLSFFM FVTLLVFISV FPVYANDFEK HGTYYEIFVR SFYDSDGDGI GDLKGIIEKL 
DYLNDGDPET IADLGVNGIW LMPIFKSPSY HGYDVTDYYK INPDYGTLED FHKLVEAAHQ
RGIKVIIDLP INHTSERHPW FLKASRDKNS EYRDYYVWAG PDTDTKETKL DGGRVWHHSP
TGMYYGYFWS GMPDLNYNNP EVQEKVIEIA KYWLKQGVDG FRLDGAMHIF PPAQYDKNFT
WWEKFRQEIE EVKPVYLVGE VWDISETVAP YFKYGFDSTF NFKLAEAVIA TAKAGFPFGF
NKKAKHIYGV YDREVGFGNY IDAPFLTNHD QNRILDQLGQ DRNKARVAAS IYLTLPGNPF
IYYGEEIGMR GQGPHEVIRE PFQWYNGSGE GETYWEPAMY NDGFTSVEQE EKNLDSLLNH
YRRLIHFRNE NPVFYTGKIE IINGGLNVVA FRRYNDKRDL YVYHNLVNRP VKIKVASGNW
TLLFNSGDKE ITPVEDNNKL MYTIPAYTTI VLEKE