Gene Hore_14560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_14560 
Symbol 
ID7313996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1547637 
End bp1549973 
Gene Length2337 bp 
Protein Length778 aa 
Translation table11 
GC content39% 
IMG OID643611896 
ProductKojibiose phosphorylase 
Protein accessionYP_002509200 
Protein GI220932292 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000528962 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAT ACCATCTGAA GAAATTTTAC CAGAATCCGC TGTATAAATA TGAACCATGG 
ACGATAACTG AGAAAGAATT TAAGATAGAA AATAATCACC ACAATGAAAC AATTTTTGCC
CTCGGTAATG GTTATATGGG ATTAAGGGGG ACTCTGGAAG AAGATTATTC AGGGCCGGAA
CAGACAACTA CCCCTGGTAC ATACATAAAC GGGGTTTATA CTGAAGAGAA AATAATATAC
GGAGAAGAGG CACCTGATTT ACCGGAGTTT TATCAGACCA TGGTCAATCT GGCTGACTGG
ACTGGAATTA ACCTTTACCT TGGTGATGAA AAATTTGATA TGTTACAGGG TAAGGTCAGC
GGTTATAAAC GGGTTCTTGA TATGAAGGAA GGGACTTTAA CCAGGGAACT TACCTGGGAG
AGTCCTCAGG GAAGGAAAGT TAAGTTAACA ATAAAAAGGT TTTTATCCCT GGCATCACCA
CATATCGGAG TTATTAAATA TAGCTTTACC CCAGTTAATT TTGATGGTAC CATAACCGTT
GAGTCATCTC TAAAGGGAGA TGTTCAAAAT TATCATACCT TAAGAAATAA AAAACCTTTA
CAGGTAATAG ATAAGGCTTT TTCCGATGGA ATGCTGTATC TTGTTCATAA AATAAAAAAC
AGTGGTATTG AAGTGGCTAC TGCTGTTAAG AATGTAATTT CAGCTGGTTC AGGTGAAATT
GAAACTACTA ATAGCCTTAT TGAGGGAGAT AAGGTTATAA AATTATATAA GATCGAAGCC
AGCCAGGGTC AAGAGTATAC TCTAGAGAAA TATGCCTGTC TGTACCATTC CCTGGAGATA
GATAAAGAAG ATATTGTGGA TAAAGTTATT ACTGAAGTTA GTAAGGCCGC TGAAAAGGGC
TGGGATTATC TTTTCGAAAA CCATTGTCAA TTTTTACAGA ACTACTGGGA TGATGTTGAT
ATTAAAATAT ACGGAGATGA TGCCCTGCAG CAGGCTTTAA GGTTTAATGC CTTTCATCTC
ATTCAGTCAA CCGGGCGTGA CGGAAAGACT AATATTGCTG CCAAAGGACT CACCGGAGAA
TATTATGAAG GGCATTATTT CTGGGATACA GAAACATATA TATTGCCTTT TTATCTCTAT
AGTAAACCGG AGATTTCAAA GGATCTACTT ATGTTCCGTT ACTATACCCT TGATGAAGCC
CGGGAAAATG CCCGCAGGAT GAGGCTGGAT GGGGCCTTAT ACCCGTGGCG AACGATTAAT
GGTAAAGAAG CCTCAGGGTT TTTTATGGGT TCAACCGTAC AGTATCATAT AGATGCTGAC
ATTGCTTATG CCATTAACCT GTATGTAACT GCAACCAGAG ATTATGATTT CTTGTTTAAT
TACGGCGCTG AAATCCTGTT TGAAACTGCC CGGATGTGGG CCAGCCGGGG GAGTTATATT
GAGCTTAAAG GAAATCGCTT CTGTATCAAT GAGGTTTGTG GTCCGGATGA ATATAAACCG
GGAGTCAATA ATAATTGTTA TACCAACTAT ATGGCTAAAT TGAATCTGGA ACTGGCATTA
GAGGCATACC GGTTGATGGA GAAAAAAGCC CCTGATAATT TAAAAAAATT AGTTGAAAAG
ATTAATTTAC AGGATTCAGA ACTTGAAGCC TGGAAAAGGG CTGCTGACAA CATGTATTTA
CCATATAATG AAGAACTGGG AATCCATCCC CAGGACGATT CCTTCCTGTA TAAAGACCCT
ATAGATGTAG ATAGCATACC GGAAGAGGAT ATTCCTCTGG TTAAAAACTG GCATCCCCTG
GTTATATGGC GCTACCAGGT AATAAAACAG GCAGATGTAA TTTTATTGAT GTTATTACTG
GGTGACCAAT TTACCACCCA GCAGAAGAAA GCCAACTATG ATTTTTATGA ACCCAAAACT
ACCCATGATT CCTCTTTGTC ACCGGCAATT TATAGTATTA TTGCCAGTGA AATCGGGTAT
CATGACTCTG CCTACAATTA CTTTATGCAA ACAGCCAGGC TGGACCTGGA TGATTATAAT
AAAAATGCCT ATCAGGGTGT CCATACAGCC TGTATGGCCG GAACCTGGCT TGCGTTAGTC
CAGGGATTTG CTGGAATGCG TAATTATAAT GGCGAACTCC ACTTTAGCCC CTGTTTACCG
GAAAAGTGGG ATGGGTATGA ATTTAAGGTT AAGTTCAGGG GAAGACAGCT TAAAATTACT
GTAAATGAAG AGGGAGTCAT GTATAAGCTT ATTAAAGGTG AAAAATTGAG CTTCTACCAT
GGAGATAGGA AACTGGAATT AAATTCAGGG GAGGAGCATA ATATAGAAAT GGGATAA
 
Protein sequence
MRKYHLKKFY QNPLYKYEPW TITEKEFKIE NNHHNETIFA LGNGYMGLRG TLEEDYSGPE 
QTTTPGTYIN GVYTEEKIIY GEEAPDLPEF YQTMVNLADW TGINLYLGDE KFDMLQGKVS
GYKRVLDMKE GTLTRELTWE SPQGRKVKLT IKRFLSLASP HIGVIKYSFT PVNFDGTITV
ESSLKGDVQN YHTLRNKKPL QVIDKAFSDG MLYLVHKIKN SGIEVATAVK NVISAGSGEI
ETTNSLIEGD KVIKLYKIEA SQGQEYTLEK YACLYHSLEI DKEDIVDKVI TEVSKAAEKG
WDYLFENHCQ FLQNYWDDVD IKIYGDDALQ QALRFNAFHL IQSTGRDGKT NIAAKGLTGE
YYEGHYFWDT ETYILPFYLY SKPEISKDLL MFRYYTLDEA RENARRMRLD GALYPWRTIN
GKEASGFFMG STVQYHIDAD IAYAINLYVT ATRDYDFLFN YGAEILFETA RMWASRGSYI
ELKGNRFCIN EVCGPDEYKP GVNNNCYTNY MAKLNLELAL EAYRLMEKKA PDNLKKLVEK
INLQDSELEA WKRAADNMYL PYNEELGIHP QDDSFLYKDP IDVDSIPEED IPLVKNWHPL
VIWRYQVIKQ ADVILLMLLL GDQFTTQQKK ANYDFYEPKT THDSSLSPAI YSIIASEIGY
HDSAYNYFMQ TARLDLDDYN KNAYQGVHTA CMAGTWLALV QGFAGMRNYN GELHFSPCLP
EKWDGYEFKV KFRGRQLKIT VNEEGVMYKL IKGEKLSFYH GDRKLELNSG EEHNIEMG