Gene Hore_14510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_14510 
Symbol 
ID7313991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1541059 
End bp1542060 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content40% 
IMG OID643611891 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002509195 
Protein GI220932287 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000000207214 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA TAACAATGAA AGATATAGCA AAAGCTGCCA AAGTATCTAA ATCAACGGTT 
TCCAGGGCCC TGAGTAATGA TCCCCGGGTT AATGAAGAAA CCAGAAAAAA GGTTGTTAAG
ATAGCCAGGG AAATGAATTA TCGTCCCCAT CAGGTTGCTC AGGCTCTGGC CAAAAAGAAT
ACCAATATAA TAGGGGTTGT ACTACCAACT TTCCCCAGAA CAGTAGCTGA CCCCTTTTTC
CTGGAATTCC TCCAGGGAAT AGGAGAAATA GCTGTTGAAA AGGGATATAG CCTGACCCTC
CCCAATCTTG CCAGGAAGGA AATTCAAAAC CTTGGTCAGG TTATAAACAA AAATACGGTC
GACGGGGTAA TTTTGACTGA ACCAAAAATC GATGACCCCA GGATTAAATA CTTAAAAGAA
AAGGAAATTC CCTTTGTGTT TCTGGGAAAT CCCATGGATA AAGACGATGT TTACTGGGTA
GAAACTGATA ATATAAGGGG ATCCTATCTT GCAATGGAAT ACTTGATTAA GTCCGGTCAT
AAAAAAATAG CTACTGTTGC CGGGTCTCCC GACCTGGTGG CCGGTAAATA CAGGTATTTA
GGTTATAAAA AAGCCCTGGA AAATTACGGT TTAACCATTG ATAAAAATCT AGTCTGTTAT
GCTGATTTTA CCGAAGAGGG GGCCTATTCT GCTGTTCTAA AGTTATTGGA AAAGAGGAAC
GATTTTACAG CTATTTTTGT AGCCAATGAT TTGATGGCCT TCGGGGTTAT AAAGGCTCTG
AAGGAAAAAG GCCTCTCAAT ACCGGAAGAT ATAGCGGTTA TGGGATATGA TGGTATTAAG
CTGGGGGAAT TTATTGAACC TCCTTTAAGT ACCATAAAAA TACCCAGCCG GCAGATGGGA
AGGGTGGCTT TAAATCTTCT TATTAAGTTG ATTAATGGTG AAAATGTCAA GGATAAACAT
GTCTTACTAC CACCGGAGTT AATGGTGAGA GAGTCAGCTT AA
 
Protein sequence
MDKITMKDIA KAAKVSKSTV SRALSNDPRV NEETRKKVVK IAREMNYRPH QVAQALAKKN 
TNIIGVVLPT FPRTVADPFF LEFLQGIGEI AVEKGYSLTL PNLARKEIQN LGQVINKNTV
DGVILTEPKI DDPRIKYLKE KEIPFVFLGN PMDKDDVYWV ETDNIRGSYL AMEYLIKSGH
KKIATVAGSP DLVAGKYRYL GYKKALENYG LTIDKNLVCY ADFTEEGAYS AVLKLLEKRN
DFTAIFVAND LMAFGVIKAL KEKGLSIPED IAVMGYDGIK LGEFIEPPLS TIKIPSRQMG
RVALNLLIKL INGENVKDKH VLLPPELMVR ESA