Gene Hore_14480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_14480 
Symbol 
ID7313988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp1538708 
End bp1539352 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content42% 
IMG OID643611888 
ProductDi-trans-poly-cis-decaprenylcistransferase 
Protein accessionYP_002509192 
Protein GI220932284 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.105824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTC CAGACCATAT CGGAGTTATA CCAGATGGAA ACCGACGCTG GGCTTTAAGT 
CATGGTTTAA CCAGGGAAAA AGGCTATGCC AGTGGCCTTA AACCGGGTCT TGAAGTTTTT 
AAATTATGTA AAAAAGTGGG GGTTAAAGAA TTAACCTTTT ATGGGTTCAC TATGGACAAC 
ACCAAAAGAC CGTCTACCCA GACAGAGGCC TTCACAAAGG CCTGTATTGA TGCTGTCGAA 
ATGTTATCCC GGGAAGATGC TTCCTTACTG GTAGTAGGAA ATACTGAATC CCCTAAATTC 
CCCAGAGAAT TACTTAAATA CACAAGAAAA CGACATAAAT TTGGCAAGGG GGGACTGAAG 
GTTAACTTCC TTGTCAATTA CGGCTGGCAC TGGGATCTTT ATAATCTCAA ACAAAAGAAA 
GTTAAGAAAA GTAAGTTACA GAAATACTTG AATTCCAGTG ATATTTCAAG GGTAGATTTA 
ATTATTCGCT GGGGTGGCAG GAGAAGGCTG AGCGGTTTTC TGCCGGTCCA GTCCATCTAT 
GCCGACTTCT ATGTCATTGA CGATTACTGG CCCGATTTTA AACCTGAACA TTTTTATGAA 
GCCCTTGCAT GGTATGATAA GCAGGATATA ACCCTGGGTG GATAA
 
Protein sequence
MRIPDHIGVI PDGNRRWALS HGLTREKGYA SGLKPGLEVF KLCKKVGVKE LTFYGFTMDN 
TKRPSTQTEA FTKACIDAVE MLSREDASLL VVGNTESPKF PRELLKYTRK RHKFGKGGLK 
VNFLVNYGWH WDLYNLKQKK VKKSKLQKYL NSSDISRVDL IIRWGGRRRL SGFLPVQSIY 
ADFYVIDDYW PDFKPEHFYE ALAWYDKQDI TLGG