| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_14390 |
|---|
| Symbol | |
|---|
| ID | 7313979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1524403 |
|---|
| End bp | 1525839 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643611879 |
|---|
| Product | poly(A) polymerase/tRNA nucleotidyl transferase |
|---|
| Protein accession | YP_002509183 |
|---|
| Protein GI | 220932275 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000000101542 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTTACAA AAGATTATAA ACTGATTTTC CCTGTCTTAC AGATACTCCC TGTCTTAAGG
GATATCCATG ACAGATATCA GCAGGAATTA TATCTCGTCG GGGGTGCTGT CAGGGATATC
CTGCTTCAGA GAAATCTAAA GGACTTTGAT TTTGTCTTAA AAGAACGGGT TAGAGAAGTA
GCATTGGATT TCAGCTCTAA AACAGGGGGT TCTTTTGTAC CTCTGGATAG AGAAAGGGAT
ATTTACCGGG TGGTTGCTGA TGGGTATATT TATGATTTTG CTAAAATGGT GGGGTCTACC
CTGAAAGAAG ATCTATCCAG ACGTGATTTT ACCATTAATT CTATGGCGGT AAATGTAATG
GATATTCCCG GTAATTTCGG TAATAAAGAG CCATATCTAA TTACCGAATA TATAAATGAT
TACATAATAG ACCCCTTTGG TGGCTGGACT GATCTGGAGA AGGGTATTAT TAGGGTTACT
GATGACAAAG TTTTTATCAA GGACCCACTT CGTCTCTTAA GGGCTTTCAG GTTTAAATCA
GAATTAGGAT TTTTAATTGA AAAAGATACT GAGAACCTGA TTCACAGGGC CTCTCCCCTT
ATCAGGAAAA TTGCCAGGGA ACGGATTGGT TATGAATTTA GCAGGATATT ATCAAACCCC
GGGGTGGCAA GAGTAGTTAA ATATGCAGAA GATAATTTTA ATCTCTTTTC TTATGTTATT
CCTGTTATTA AAAGAATGAA AGAAAAAACA CTTGAAGAGG GGTCAGGTAA GGGGTGGAAT
CTGGATGCCT GGAATCTGGG AATCAGGACA CTTGAATGCC TTGAAGATTA CATTAGTAAG
GGTTTTTATA GAGATAGAAT TAAAGATGAC AGGCTGGCCT GCCTTAAATT AGCCGCCTTC
TTTTTCTATA TTGGTAACAT TAAGGGTAGT CGAATGAAAA GCAGGGCTAA ATACACCCCT
GATAGGCAGG GGGGCAGGAT GGTTGAAAAA ATATTACTGG ATTTAAGGAT GGGCAAAAAG
TGCCGGAGGT ATGTGAAACA GCTTATCTGT TATCATGACT ATCCGTATTA TTTATTTCAA
AAGAAGAAAT TACAACCCCT GGATAAAACC CGTTTCTGGC TGGAATTAAG CGGAGACGGG
TTTGATGTTT GTCTCCTGTC TCTGGCCAGT TTTACTGGCA GCAATTCAGA GCCGGTTAGA
ATAAAAGCCT ACAGGGAGTT TATTAATGGT TTGCTATTAT ATGGAGACCG GGTCAAAAAG
CTAACAACTA CCCCTTTGCT AAATGGGGAG GAAATAAGGA GTTGTTTTAA CCTTGAGGAA
GGGCCTGTCA TTGGATATTT ATTAAAAAAG CTTAAAGAAG CCCAGGCAAA CGGTAAAGTT
ATGACCAGAA AAGAGGCTAT AAATTATCTG GAGAAATATA TAAAAGAGGA ATTATAG
|
|---|
| Protein sequence | MFTKDYKLIF PVLQILPVLR DIHDRYQQEL YLVGGAVRDI LLQRNLKDFD FVLKERVREV
ALDFSSKTGG SFVPLDRERD IYRVVADGYI YDFAKMVGST LKEDLSRRDF TINSMAVNVM
DIPGNFGNKE PYLITEYIND YIIDPFGGWT DLEKGIIRVT DDKVFIKDPL RLLRAFRFKS
ELGFLIEKDT ENLIHRASPL IRKIARERIG YEFSRILSNP GVARVVKYAE DNFNLFSYVI
PVIKRMKEKT LEEGSGKGWN LDAWNLGIRT LECLEDYISK GFYRDRIKDD RLACLKLAAF
FFYIGNIKGS RMKSRAKYTP DRQGGRMVEK ILLDLRMGKK CRRYVKQLIC YHDYPYYLFQ
KKKLQPLDKT RFWLELSGDG FDVCLLSLAS FTGSNSEPVR IKAYREFING LLLYGDRVKK
LTTTPLLNGE EIRSCFNLEE GPVIGYLLKK LKEAQANGKV MTRKEAINYL EKYIKEEL
|
|---|
| |