| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_14130 |
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| Symbol | |
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| ID | 7313953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1500497 |
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| End bp | 1501966 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643611853 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_002509157 |
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| Protein GI | 220932249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000124696 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAAATC AAATAATAAT AAATTCAGGA ATAAAGGAAA AAAGGGCTGC TATATTAATG
GATAATGTTC TGGAGGACAT AGTTATTGAG CTGGATAGTT ATAAAAAAAT TGTTGGTAAT
GTTTACAGGG CCCGGGTTAT AGATGTCTTA CCGGGAATGC AGGCTGCGTT TGTCGATATT
GGATATGATA AAAATGCCTT TTTACATGTT AGTGATATTT ATCCCCTGCT CGACGAAAAG
CAGTTAAAAT TAAAAAAAGA AGGCAAGCTC GGGATACAGC ATGTTTTACA ACCAGGTCAG
GAACTTATGG TCCAGGTTGT AAAAGAACCT ATCTACGAAA AAGGGGCAAA AGTAACCTGC
AAGATATCCT TACCCGGAAG ATATCTGGTA TTATTACCTG GTGAATACAG GACTGCAATT
TCACGAAAGA TTAAAGACTT TGATGAAAGA GATAGATTGA AGAAAATAGT TGGGAAACTC
AAGGATCCAG ATATGGGATT AATAATCAGA ACCAACTCAC GATACAAAAA GGCTGATTTG
CTTGAACTGG ATTATTCTTA CCTGAAACGG ACCTGGACCC AGATAAAAGA GAATTATAAT
AACAGTAAGG CCCCGGACCT TATATATGAG CATGCCAGCC TGTTAAAGAC AATTGTCCGG
GATTATTTAA ATAAAGATGT GGATAAGGTT TTAATAGATG ATGAATCTGA TTACCGTGTT
CTTCTGGAGT TGAGTGAAAA ACTTGCCCCT GATTTAAAAA ACAGGATAAA TCTTTATAAT
AAGAAGATGC CGATATTCCA TGTTTATGGA ATAGAGAAAG AACTTGAAAG GGCCATCAGG
AAGAAAATCT GGCTAGATTC TGGTGGCTTT ATAGTGATTG AACAAACTGA GGCCCTGGTG
GCTATTGATG TCAATACCGG TAAATATACC GGAAAAAAGA ATGCTGCCAG GACCATTTTA
AAAACCAATC TTGAAGCAGC CCGGGAAATT GCCCGGCAGC TGAGGCTTAG AGATATAGGT
GGGATAATAA TCATTGATTT TATTGATATG AAAGAAAGAC GGCACCAGCA GGAGGTTCTG
GAAACCTTTG AGAAGGAACT GGCAAAAGAC AGGTCTGTAA CTTCAATTCA GGGGTTAACT
AAACTTGGGT TACTGGAGAT GACCCGGCAG AAAGTTCGAG AAGGACTGGG GGAACTTATG
CAAAAAGAGT GTTCTTACTG TCGGGGGAAG GGATTAATTT TATCGGCTAA CAGTGTGGCT
GAATCAATAA TCAGAAATAT CCAGTTGAAA AAAGCCAGTG AAGAATTTTC CAGGGCAGTA
GTAGAGTGTC ATCCCCTGGT AGTTTCTAGC CTGAAAGGGG ATAATGGTGA GGTATTACAA
AAAATATTTA AAAAAACAGG TGTCAGCCTT GAATTAAAAC CGGTTAATAG TCTTCATATT
GAAAAATACA GGATTAATAT AACAGGTTAG
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| Protein sequence | MVNQIIINSG IKEKRAAILM DNVLEDIVIE LDSYKKIVGN VYRARVIDVL PGMQAAFVDI
GYDKNAFLHV SDIYPLLDEK QLKLKKEGKL GIQHVLQPGQ ELMVQVVKEP IYEKGAKVTC
KISLPGRYLV LLPGEYRTAI SRKIKDFDER DRLKKIVGKL KDPDMGLIIR TNSRYKKADL
LELDYSYLKR TWTQIKENYN NSKAPDLIYE HASLLKTIVR DYLNKDVDKV LIDDESDYRV
LLELSEKLAP DLKNRINLYN KKMPIFHVYG IEKELERAIR KKIWLDSGGF IVIEQTEALV
AIDVNTGKYT GKKNAARTIL KTNLEAAREI ARQLRLRDIG GIIIIDFIDM KERRHQQEVL
ETFEKELAKD RSVTSIQGLT KLGLLEMTRQ KVREGLGELM QKECSYCRGK GLILSANSVA
ESIIRNIQLK KASEEFSRAV VECHPLVVSS LKGDNGEVLQ KIFKKTGVSL ELKPVNSLHI
EKYRINITG
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