Gene Hore_13940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_13940 
Symbol 
ID7314183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1485623 
End bp1486357 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content32% 
IMG OID643611834 
Productamidohydrolase 2 
Protein accessionYP_002509138 
Protein GI220932230 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0383348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTTTTT TTTCTGCTGT TAGAAGGTCA ACACCTGAAA GAATAATACG TGATATGAAA 
CTTAATAATA TTTCTAAATC AGTGGTATTG CAACTTAATA CCCCTGAATG TGATAGTAGT
GAAGATATAG CGGAAGTAAT TCCAAAGTAT GATGAATTAA TCACCTTTGG TAATATTCAC
CCTTATGACA GAGAACTTTC ATTGAAAATT GAAAGGAATT TAAACTTTGG TGTGAAGGGA
TGGAAGATTG CCCCTCATGT GATAGACATT GATATTGATG ATGCAAAAAC GATTCAGTTA
TTAAAATTAC TTGCCCAAAC CAAATTGCCA ATTATATCTT GTAGTGGATT GGCATTTCCT
GAGAACCGAA TAAAAAAATT ACCAGGTAAA ATAAGAAAAA ACCTGGAAAC CCAAAATATT
AATAAGTTTT ATAAAGTTTT AAAGGAAATA CCCAATGTGC CCTTTATTTT TGCCCATGCT
GGTATGTATC AGACTAAAGA GCTGGTAAAA TTAATGAAGT TATATCCTAA TACCTATGTT
GAAATTAGTA CCCAGCCACC AGCAAAAATT AGGCTACTAC TTGATGAAAT TGGTAGTGAA
CGTATTTTGT ATGGTACAGA TTATCCAGCA TTTAACCATT CCTTTTCTAT TGTATCAGTA
TTGCGGGCTA CTAAGGATGA AACTGAAAGA AAAAATATAT TTTACAATAA TGCTAAGAAG
TTATTAAAAA TATAA
 
Protein sequence
MVFFSAVRRS TPERIIRDMK LNNISKSVVL QLNTPECDSS EDIAEVIPKY DELITFGNIH 
PYDRELSLKI ERNLNFGVKG WKIAPHVIDI DIDDAKTIQL LKLLAQTKLP IISCSGLAFP
ENRIKKLPGK IRKNLETQNI NKFYKVLKEI PNVPFIFAHA GMYQTKELVK LMKLYPNTYV
EISTQPPAKI RLLLDEIGSE RILYGTDYPA FNHSFSIVSV LRATKDETER KNIFYNNAKK
LLKI