Gene Hore_13480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_13480 
Symbol 
ID7314134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1445388 
End bp1446053 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content27% 
IMG OID643611788 
Productcyclase family protein 
Protein accessionYP_002509093 
Protein GI220932185 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0322742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATGTTA TAATTAATGA AAATAGAAAG AGTGAAATAA TAATGGGTAA ATTCATAGAT 
TTGAGCCAGG AAATAATTGA TAATATGAAT GTTCATCCAT ATGACGATAA AGTTAAATTA 
TATCAGGATA AATATTTAGA AGAAGATGAG TATAATAATT TTAGATTAGA AATTGGAATG 
CATGCTGGTA CTCATATAGA TACACCGATG CATTTAACTG ATCGGAAAAT ATTTATAAGC 
GAGATACCCT TAGAGAAATT TGCTGGAAGT GGTTGTTTAC TTGATGTAAG AGATGAAAAA 
ATAATTGGTT TTAAACAAGA ATATATAGAT GTCGTTAATG AAAACGATAT TGTAATATTG 
TATACAGGTT ATAGTGATAA ATATGGCACA GACGAATATT ATACAAACCA TCCAGTAATT 
AGTGAAGCTT TAGCTGATTT TTTAGTTGAC AAAAATATAA AAATGTTGGG AATGGATATG 
CCTTCGCCCG ATAACTATCC ATTTGAGATA CATAAAAAAC TTTTTAAAAA TAACATATTA 
ATAATTGAGA ATTTGACTAA TTTATCCGAG TTAGTAAAAT TTAATAAATT TAATATAATT 
GCTTTTCCTT TAAAGATTAA AGCTGAAGCG TCTATGGTTA GAGTTGTTGC CAATATAGAA 
CTTTAA
 
Protein sequence
MYVIINENRK SEIIMGKFID LSQEIIDNMN VHPYDDKVKL YQDKYLEEDE YNNFRLEIGM 
HAGTHIDTPM HLTDRKIFIS EIPLEKFAGS GCLLDVRDEK IIGFKQEYID VVNENDIVIL 
YTGYSDKYGT DEYYTNHPVI SEALADFLVD KNIKMLGMDM PSPDNYPFEI HKKLFKNNIL 
IIENLTNLSE LVKFNKFNII AFPLKIKAEA SMVRVVANIE L