Gene Hore_13310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_13310 
Symbol 
ID7314117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1430192 
End bp1430836 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content39% 
IMG OID643611771 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002509076 
Protein GI220932168 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00102117 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTTG GGGCACTTTT TGTATCTGCA TTTATTATTG GTTTTTCCGG AGCTATGATG 
CCAGGACCTT TACTGACTTA TGTTATCAAC GGAAGTTTGA GGAAAGGTTT TAAAGCAGGT 
CCTCTTTTAA TTGTGGGTCA CGCCATTTTG GAACTTATAT TGATTGTGTT ATTATTATTG 
GGGCTTAATA ACCTATTTTC AAACCAGATA TTTACTTCAG CTCTGGGCCT TATCGGAGGT 
AGTATTTTAC TCTGGATGGG TTATGGAATG ATAAAATCAG TCATAAAAAG GGAAATATCG 
TTAGAAGGAC AGGTTGAAAA TAAAGTTAAC ATCGCAGGGT TGGTGTTACC CGGGGCCATT 
GTTAGTATTT CAAATCCTTA CTGGGTACTG TGGTGGGCTA CAGTTGGAAT GACTTATCTG 
GCTAAAAGCC ATCAACAGGG AGTCCTGGGA ACCGGGGCTT TTTTCACAGG ACATATTCTG 
GCTGATTTTG TCTGGTATTC ATTTATTAGC TGGCTGGTTG TCTTTGGCCG GAAATTGTTA 
AACGACAGGA TGTATAGAGG GCTGGTAGCC CTGTTCGGGA TTATCCTTAT TTATTTTGCT 
TTAATGTTTA TGTATGACGG GGTTAAATTT TTTATTTTTT CGTGA
 
Protein sequence
MSVGALFVSA FIIGFSGAMM PGPLLTYVIN GSLRKGFKAG PLLIVGHAIL ELILIVLLLL 
GLNNLFSNQI FTSALGLIGG SILLWMGYGM IKSVIKREIS LEGQVENKVN IAGLVLPGAI 
VSISNPYWVL WWATVGMTYL AKSHQQGVLG TGAFFTGHIL ADFVWYSFIS WLVVFGRKLL 
NDRMYRGLVA LFGIILIYFA LMFMYDGVKF FIFS