Gene Hore_13250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_13250 
Symbol 
ID7314111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1424050 
End bp1425309 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content43% 
IMG OID643611765 
ProductDNA-directed DNA polymerase 
Protein accessionYP_002509070 
Protein GI220932162 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000669241 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATAG ATTACAGTCA GCTTCCCAGA AACAGTATCA TGTGTATTGA TATGAAGTCT 
TTTTATGCCA GTATTGAAGC TGTTGCCAGG GGGCTTGACC CTTTGAAAAC CTGCCTTGCT
GTAGTGGGCG ATAAACAGAG GTCCGGTTCT GTGGTTCTGG CGGCGACTCC TGCCCTTAAA
GAAAAGTATA ATATCAGGAC CGGTAATAGA TTATATGAAA TACCGGATTC CTCTGAAATA
AAAATTGTGG AAGCCAGGAT GGGGCTTTAT CTGGACAAAT CTATAGAAAC TACATGCCTT
TTTAACAGAT TTGTTCCCCT CAGGGATATT CATGTTTATT CAATTGATGA GGCCTGGTTA
AAACTGGATG GAACGGAGAG GCTTTTTGGG GATAAATGGG AGGTAGCTTC TAAAATTAAA
GAATTGCTCT TAAAAGAAAT GGGACTTCAT TGTAGTATTG GGCTGGGTCC TAACATGTTT
CTGGCCAAGG TGGCTATGGA TATTGAAGGC AAACGAAAGG GAATTGCTGA ATGGACTTAT
GAAGATGTTC CTGAAAAGTT ATGGCCAGTA AAACTGGAAA AATGTTGGGG GGTAGGGGTC
CGCCTGGCTC GACAATTTAA CCGGATTGGG GTTAGGACCG TTGGTGATCT TGCTCATTTG
CCCCTATCCT ATCTCGAGAA TAAATATGGA ATTATGGGTA GCCAGCTTTA TTACCATGCC
TGGGGTGTTG ACCTCTCCAA ATTAGAAGGC CATTATTATA ATCAACCTAA AAATGTTGGA
AAAGGGGTTA CCCTTCTGCG TGATTACAGT AACCCCAGAG AGATAAAAAC TGTTATTATG
GAGCTATGCG AAGAAGTAGC CCGGCGGGCC CGCAAGGAAA ACCTGGCCGG GAAGACAATT
GCTCTTACCG TGGGCTTTAG TAAGGATGAA GTGGAAAAGG GGTTTCACGT TCAGAGAACT
ATTAAATACC ATACCAATTT GACTATGGAT ATATACCAGG TATGTTTAGA TCTATTTAAT
GAGAACTATT CAGGACAGGT GGTAAGAAAA CTGGCAGTTT CCCTGGGTAA TTTTATTCCT
GATTCCAGTA TGCAGTTAAG CCTGTTTGAG GATAAGCTTA AAAAAATTAA TCTGGCCCGG
ACAATGGACA GAATACGCGA TAAATATGGT TATACGGCTA TCTTAAGGGC CAGGAGCCTG
ACCAGGGGAG CTATAAGCTT CAGGCAGCAA AAGTTAATTG GAGGCCATAA GGCCAGGTAA
 
Protein sequence
MEIDYSQLPR NSIMCIDMKS FYASIEAVAR GLDPLKTCLA VVGDKQRSGS VVLAATPALK 
EKYNIRTGNR LYEIPDSSEI KIVEARMGLY LDKSIETTCL FNRFVPLRDI HVYSIDEAWL
KLDGTERLFG DKWEVASKIK ELLLKEMGLH CSIGLGPNMF LAKVAMDIEG KRKGIAEWTY
EDVPEKLWPV KLEKCWGVGV RLARQFNRIG VRTVGDLAHL PLSYLENKYG IMGSQLYYHA
WGVDLSKLEG HYYNQPKNVG KGVTLLRDYS NPREIKTVIM ELCEEVARRA RKENLAGKTI
ALTVGFSKDE VEKGFHVQRT IKYHTNLTMD IYQVCLDLFN ENYSGQVVRK LAVSLGNFIP
DSSMQLSLFE DKLKKINLAR TMDRIRDKYG YTAILRARSL TRGAISFRQQ KLIGGHKAR