Gene Hore_13050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_13050 
Symbol 
ID7313626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1399813 
End bp1400781 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content41% 
IMG OID643611745 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002509050 
Protein GI220932142 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGA TATTAGATGT CAGGAATTTA AAACTTCATT ATTTTACAAC CAAAGGTGCG 
GTTCATGGAG TTGATGGAGT ATCCTTTTAT ATGAAAGCAG GGGAAACCCT GGGGGTTGTA 
GGGGAATCAG GTTGTGGAAA AACTACCCTG GGGACAGCCT TGCTTAATAT GCCTACTCCT 
CCGGGGAAGA TAGTTGATGG TGAAATAATC ATTGATGGTA AAGATATTCT TAAACTTAAT 
GAGAATGAAT TAAGGAAAAA TGTACGCTGG GAAAAAATAT CGATGGTTTT TCAGGGAGCC 
ATGAATTGTT TAACTCCTGT TTATACTGTT GAAAAACAGA TGATGGAAAC CCTCCAGCAT 
CACCGGAAAA TGAAAGAAAA GGAAGCAAGA GAACGGATAA AAAAATATGT CAATCTGGTG 
GGGTTATCAG ATGATGTCTT AAAGAGATAC CCTCATGAAT TATCAGGAGG AATGAAGCAG 
CGTATTGTTA TTGCCATGGC TCTATTTCTA GAACCCCGGG TTGTCATTTG TGATGAACCA 
ACTACAGCCC TGGATGTAGT TGTTCAGGCC CAGATAATTA ACCTGTTAAA GGAACTTAAA 
GAGAAATTAA AGCTATCTTT TATATTTATC ACCCATGACC TGTCAACTGA AGCCGAAGTA 
TCTGATAGAA TCATGGTTAT GTATGCTGGT AAAGTTGCTG AAATAGGTAC CAACGAACAG 
ATTTATGGTT CTCAGGGTCC AGCCCATCCC TATACCCGGA GGCTCCTGGC AGCAACACCA 
AGGTTACATA AAAAGGTAAA TAAACTTGAT TTTATTCCGG GGACACCACC CGATCTTCTT 
AATCCTCCAG AGGGCTGCCG TTTTCATCTG AGGTGTGATG TAGCCATGGA TAAATGTAAG 
AAAGAAGAAC CACCGGTTAA AGAAATTGAG CCGGGTCATT TTGTAGCCTG CTGGAGGTGT 
TTTGAATGA
 
Protein sequence
MEKILDVRNL KLHYFTTKGA VHGVDGVSFY MKAGETLGVV GESGCGKTTL GTALLNMPTP 
PGKIVDGEII IDGKDILKLN ENELRKNVRW EKISMVFQGA MNCLTPVYTV EKQMMETLQH 
HRKMKEKEAR ERIKKYVNLV GLSDDVLKRY PHELSGGMKQ RIVIAMALFL EPRVVICDEP 
TTALDVVVQA QIINLLKELK EKLKLSFIFI THDLSTEAEV SDRIMVMYAG KVAEIGTNEQ 
IYGSQGPAHP YTRRLLAATP RLHKKVNKLD FIPGTPPDLL NPPEGCRFHL RCDVAMDKCK 
KEEPPVKEIE PGHFVACWRC FE