| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_12960 |
|---|
| Symbol | |
|---|
| ID | 7313617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1390797 |
|---|
| End bp | 1391447 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643611736 |
|---|
| Product | Alkyl hydroperoxide reductase |
|---|
| Protein accession | YP_002509041 |
|---|
| Protein GI | 220932133 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0450] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0000248971 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA TTAATAACAT ACCATTAATA GGTGATAGGT TTCCTGAAAT GGAGGTAAAA
ACTACTCACG GGGTAAAGAA TCTTCCAGAG GATTATAAGG GAAAATGGTT TATTCTTTTC
AGCCATCCGG CAGATTTCAC CCCGGTATGT ACAACTGAGT TTGTTGCTTT TCAAAAAAGA
TTTGATGAAT TTAAAAAAAT GGATGCGGAA TTAATTGGAT TAAGTATTGA TCAGGTTTTT
TCCCACATTA AATGGGTGGA ATGGATAAAT GATAACCTTG ATGTTGAAAT TAAATTTCCT
GTTATTGCAG ATGATACCGG GAGGGTTGCC TCAAAGCTGG GGTTAATTCA TCCCAATAAG
GGAACCAATA CAGTTAGGGC AGTATTTATT GTAGACCCTG AAGGTATAGT CCGGGCAATC
CTTTATTATC CACAGGAACT GGGACGTAAT ATGGATGAAA TTTTAAGGAT GGTTAAGGGC
CTTCAGATTT CTGATGATAA CAATGTTGCT GTACCTGCTA ACTGGCCAGA CAATGAACTT
ATTAACGACC GGGTTATTAT TGAACCTGCC TCAGATGAAG AAACAGCTAA AAAGCGGCTT
AAAGAACACA AATGCTTTGA CTGGTGGTTC TGCCATAAAG AGTTAAAATA A
|
|---|
| Protein sequence | MENINNIPLI GDRFPEMEVK TTHGVKNLPE DYKGKWFILF SHPADFTPVC TTEFVAFQKR
FDEFKKMDAE LIGLSIDQVF SHIKWVEWIN DNLDVEIKFP VIADDTGRVA SKLGLIHPNK
GTNTVRAVFI VDPEGIVRAI LYYPQELGRN MDEILRMVKG LQISDDNNVA VPANWPDNEL
INDRVIIEPA SDEETAKKRL KEHKCFDWWF CHKELK
|
|---|
| |