Gene Hore_12890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12890 
Symbol 
ID7313610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1383066 
End bp1384079 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content33% 
IMG OID643611729 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_002509034 
Protein GI220932126 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.02263e-17 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAAT TAGAGAAAAT ATTAAAGGGA GCCAAAAAAA ATTTAAAACC GGTATATCTT 
ATTTACGGTG AAGATAAATA TTTAAGGGAA CAATTTATTG ATAAATTTAT TGATAAGTTT
GTAAAACAGG AAGTCAGGGA TTTTAACCTA ACTTTTATTA ATGACGGGGA AGATAATTTT
GTTGATAGTT TAATTGCAAA AGTAAAAACG TTACCTGTTA TGTCTGACAG GAGGTATGTT
GTTGCCCGGT GTAAAGATTA TTTTACCGGT AAAAATGGTA ATGATAATAA ATTAGCAAAA
TTATTTGATG ATTTTCCAGA GACGACCATT CTCTTAATAG TAGTTGAAGG TCAGATAGAT
AAACGGTTAA AACCTGCCAA GAAAATTAAA GAGGTTGGTG AGATAATAAA TTTAAAGGCA
CCCAGGTATA GGCAGCTTGA TAACTGGATT ATATCTAAAT TTAAAAATCA TGGAAAAAAG
GTAAATAGAT CAGTGGTTCA GTTGCTTGAA GAGATGTTCA GTAATAACCT TGAACAACTG
GAAAATGAAA TTGAAAAAGT TTCTATCTAT ACAGGAGATA AAGATTTAAT TTCTCTTGAA
GATATTCAAA AGATAATTAG CCGGGACCGG TATATAGAGG ATAATATGAT TTTTAAACTG
GTCGATGCTC TTAGTGAAAG GAATGAAGGG CAGGCTATTA TTTTGCTCAA TGACATGATG
AAGGAAGGTG AAGCACCATT AAGGATCCTG GCCATGGTGG TAAGACAGGT CAGGTTGTTA
TTATCAGTTA AGGAGCTAAA GAATGAAGGT AAATCACCGG ATCAGATAGC AAAAATATTG
GGGGAACACC CATACCCGGT AAAAAAGTGT TACCGCCAGT GTGATAATTT TAGTGAAGAA
GAACTGGAAA TAATGCTCGA AAAATTCCTT AAAGCTAATT ATGAAATAGT GACCGGAAAA
TATAAAGATA GTCGGTTTTC CCTTGAACTG GCCATGATAA GTTCGATTAA TTAA
 
Protein sequence
MGQLEKILKG AKKNLKPVYL IYGEDKYLRE QFIDKFIDKF VKQEVRDFNL TFINDGEDNF 
VDSLIAKVKT LPVMSDRRYV VARCKDYFTG KNGNDNKLAK LFDDFPETTI LLIVVEGQID
KRLKPAKKIK EVGEIINLKA PRYRQLDNWI ISKFKNHGKK VNRSVVQLLE EMFSNNLEQL
ENEIEKVSIY TGDKDLISLE DIQKIISRDR YIEDNMIFKL VDALSERNEG QAIILLNDMM
KEGEAPLRIL AMVVRQVRLL LSVKELKNEG KSPDQIAKIL GEHPYPVKKC YRQCDNFSEE
ELEIMLEKFL KANYEIVTGK YKDSRFSLEL AMISSIN