Gene Hore_12800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_12800 
Symbol 
ID7313601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1373053 
End bp1374906 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content43% 
IMG OID643611720 
Productchaperone protein DnaK 
Protein accessionYP_002509025 
Protein GI220932117 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0339068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAAA TTATAGGTAT TGACTTAGGG ACAACTAACT CATGTGTAGC CGTTCTCGAA 
GGTGGAGAAC CAACGGTTAT TCCAAATGCA GAAGGTAACC GCACTACACC TTCGGTTGTT
GCTTATACTA AAAAAGGGGA GCGTATTGTC GGAGAACCTG CTAAAAGGCA GGCTATTACC
AATCCAGATC AGACCATCAG GTCTATAAAG AGGCATATGG GTACTGACCA TAAGGTTACC
CTTAATGATA AGGAATATAC TCCCCAGGAA ATTTCTGCAA TGATTTTACA GAAGTTAAAA
AGAGATGCTG AAGAATACCT CGGTGAAGAA GTTAATGAGG CAGTTATTAC TGTACCAGCT
TATTTTACAG ATAGTCAACG CCAGGCAACA AAGGATGCCG GTCGTATTGC CGGTCTTGAG
GTTAAAAGAA TTATCAATGA ACCTACTGCA GCAGCCCTGG CTTATGGATT GGATAAAGAG
GGAGATAAAA CCATTCTTGT TTTTGACCTG GGTGGTGGTA CCTTTGATGT TTCTTTACTT
GAAATTGGAG ATGGCGTTTT TGAGGTTGTA GCCACCAGTG GTAACAACCA CCTGGGTGGG
GATGATTTCG ATAAAAGGAT AATAGATTAT CTGGCCGAAA ACTTTAAAAA AGAATATGGT
GTTGACCTCA GGGATGACAG AATGGCTCTT CAGAGGCTTA AAGATGCCGC TGAAAAGGCT
AAAAAAGAGC TTTCCTCTGT AAAGACTACC AATATAAACT TACCTTTTAT TACCCAGACA
GAAGATGGGC CCAAACACCT GGATATTGAT TTGACACGGG CCAAATTTAA TGAGTTGACA
GAAGACCTGG TAGAAAAGAC CATGGGTCCT ACCCGTCAGG CCCTGAAAGA TGCAGGTTTA
GAACCTGGCG ACATTGATGA AGTTATACTG GTAGGTGGTT CTACCAGGAT TCCGGCCGTC
CAGGAGGCTG TTAAGGATTT TATCGGTAAA GCCCCTCATA AGGGTATCAA CCCTGATGAG
GTTGTTGCTA TGGGAGCAGC CATTCAGGCA GGTGTACTGG CGGGAGATGT TGATGATATA
GTTCTCCTGG ATGTAACACC ACTTTCCCTT GGTATCGAGA CACTGGGTGG AGTATTTACA
AAGTTAATTG AGAGGAATAC AACCATCCCT ACTTCAAAGA AGAAAGTCTT TACTACAGCA
GCTGATAATC AAACAAGTGT TGATATCCAT GTATTACAGG GTGAAAGAAA ACTGGCTAAA
GATAATGTTA CCCTGGGTCG TTTCCAGTTA ACCGGTATTC CACCTGCTCC GAGAGGAGTT
CCTCAAATTG AAGTCAAGTT TGATATTGAT GCCAATGGTA TAGTCCATGT ATCTGCTAAA
GACCTGGGTA CAGGCAAAAA ACAGCAGATT ACCATAAAAT CTTCCAGTGG CTTATCTGAA
GACGAAATCG AAAAAATGGT AAACGATGCC AGAAAACATG AGGAAGAAGA TAAAAAACGT
CTCGAGGAAA TTGAGGCCAG AAACGAAGCA GATAGTCTGG TTTATCAGAC TGAAAAGACA
CTTAAAGAAT CCGGTGACAA GGTCAGTAAG GATGTAAAAG ATAAGGTTGA AAAAGCCAAA
GATGAATTGA AAAAAGCCCT TGAGGGTGAT GATGTGGACC AGATTAAAGA AAAGACTGAA
GCCCTCAAGA ATGAGTTAAC CGAATTAAGT TCCCAGTTAT ATGCTCAGGC ACAGCAACAG
GCCCAGCAAC AGGCCCAGGG GCAGCAGGGA GCCCAGACCG ATAACCAGAC AGGACAAAAC
GATGGGAAGA CCATTGATGT TGACTATGAA GAGGTAGATG ATGACGACAA ATGA
 
Protein sequence
MGKIIGIDLG TTNSCVAVLE GGEPTVIPNA EGNRTTPSVV AYTKKGERIV GEPAKRQAIT 
NPDQTIRSIK RHMGTDHKVT LNDKEYTPQE ISAMILQKLK RDAEEYLGEE VNEAVITVPA
YFTDSQRQAT KDAGRIAGLE VKRIINEPTA AALAYGLDKE GDKTILVFDL GGGTFDVSLL
EIGDGVFEVV ATSGNNHLGG DDFDKRIIDY LAENFKKEYG VDLRDDRMAL QRLKDAAEKA
KKELSSVKTT NINLPFITQT EDGPKHLDID LTRAKFNELT EDLVEKTMGP TRQALKDAGL
EPGDIDEVIL VGGSTRIPAV QEAVKDFIGK APHKGINPDE VVAMGAAIQA GVLAGDVDDI
VLLDVTPLSL GIETLGGVFT KLIERNTTIP TSKKKVFTTA ADNQTSVDIH VLQGERKLAK
DNVTLGRFQL TGIPPAPRGV PQIEVKFDID ANGIVHVSAK DLGTGKKQQI TIKSSSGLSE
DEIEKMVNDA RKHEEEDKKR LEEIEARNEA DSLVYQTEKT LKESGDKVSK DVKDKVEKAK
DELKKALEGD DVDQIKEKTE ALKNELTELS SQLYAQAQQQ AQQQAQGQQG AQTDNQTGQN
DGKTIDVDYE EVDDDDK